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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 15-36697377-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=15&pos=36697377&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"message": null,
"variants": [
{
"acmg_by_gene": [
{
"benign_score": 15,
"criteria": [
"BP4_Moderate",
"BP6_Very_Strong",
"BP7",
"BS2"
],
"effects": [
"synonymous_variant"
],
"gene_symbol": "CDIN1",
"hgnc_id": 26929,
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"inheritance_mode": "AR",
"pathogenic_score": 0,
"score": -15,
"transcript": "NM_001321761.2",
"verdict": "Benign"
}
],
"acmg_classification": "Benign",
"acmg_criteria": "BP4_Moderate,BP6_Very_Strong,BP7,BS2",
"acmg_score": -15,
"allele_count_reference_population": 19489,
"alphamissense_prediction": null,
"alphamissense_score": null,
"alt": "T",
"apogee2_prediction": null,
"apogee2_score": null,
"bayesdelnoaf_prediction": "Benign",
"bayesdelnoaf_score": -0.4,
"chr": "15",
"clinvar_classification": "Benign",
"clinvar_disease": "not provided,not specified",
"clinvar_review_status": "criteria provided, multiple submitters, no conflicts",
"clinvar_submissions_summary": "B:4",
"computational_prediction_selected": "Benign",
"computational_score_selected": -0.4000000059604645,
"computational_source_selected": "BayesDel_noAF",
"consequences": [
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 281,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2872,
"cdna_start": 766,
"cds_end": null,
"cds_length": 846,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "NM_001321759.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "ENST00000566621.6",
"protein_coding": true,
"protein_id": "NP_001308688.1",
"strand": true,
"transcript": "NM_001321759.2",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 281,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": true,
"cdna_end": null,
"cdna_length": 2872,
"cdna_start": 766,
"cds_end": null,
"cds_length": 846,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000566621.6",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": "NM_001321759.2",
"protein_coding": true,
"protein_id": "ENSP00000455397.1",
"strand": true,
"transcript": "ENST00000566621.6",
"transcript_support_level": 5
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 281,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2240,
"cdna_start": 548,
"cds_end": null,
"cds_length": 846,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 12,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000437989.6",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000401362.2",
"strand": true,
"transcript": "ENST00000437989.6",
"transcript_support_level": 1
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 183,
"aa_ref": "N",
"aa_start": 79,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 764,
"cdna_start": 449,
"cds_end": null,
"cds_length": 552,
"cds_start": 237,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000562877.5",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.237C>T",
"hgvs_p": "p.Asn79Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000457854.1",
"strand": true,
"transcript": "ENST00000562877.5",
"transcript_support_level": 1
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 183,
"aa_ref": "N",
"aa_start": 79,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2618,
"cdna_start": 510,
"cds_end": null,
"cds_length": 552,
"cds_start": 237,
"consequences": [
"synonymous_variant"
],
"exon_count": 12,
"exon_rank": 9,
"exon_rank_end": null,
"feature": "ENST00000567389.5",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.237C>T",
"hgvs_p": "p.Asn79Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000456736.1",
"strand": true,
"transcript": "ENST00000567389.5",
"transcript_support_level": 1
},
{
"aa_alt": null,
"aa_end": null,
"aa_length": null,
"aa_ref": null,
"aa_start": null,
"biotype": "pseudogene",
"canonical": false,
"cdna_end": null,
"cdna_length": 1855,
"cdna_start": null,
"cds_end": null,
"cds_length": null,
"cds_start": null,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_count": 6,
"exon_rank": 2,
"exon_rank_end": null,
"feature": "ENST00000565792.5",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "n.159C>T",
"hgvs_p": null,
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": false,
"protein_id": null,
"strand": true,
"transcript": "ENST00000565792.5",
"transcript_support_level": 1
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 287,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2890,
"cdna_start": 766,
"cds_end": null,
"cds_length": 864,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "NM_001321761.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001308690.1",
"strand": true,
"transcript": "NM_001321761.2",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 287,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2677,
"cdna_start": 747,
"cds_end": null,
"cds_length": 864,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000569302.6",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000456477.1",
"strand": true,
"transcript": "ENST00000569302.6",
"transcript_support_level": 5
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 286,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1258,
"cdna_start": 766,
"cds_end": null,
"cds_length": 861,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "NM_001290233.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001277162.1",
"strand": true,
"transcript": "NM_001290233.2",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 286,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 1250,
"cdna_start": 758,
"cds_end": null,
"cds_length": 861,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000570265.6",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000493669.1",
"strand": true,
"transcript": "ENST00000570265.6",
"transcript_support_level": 2
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 281,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2458,
"cdna_start": 766,
"cds_end": null,
"cds_length": 846,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 12,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "NM_001130010.3",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001123482.1",
"strand": true,
"transcript": "NM_001130010.3",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 279,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2850,
"cdna_start": 750,
"cds_end": null,
"cds_length": 840,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000866625.1",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000536684.1",
"strand": true,
"transcript": "ENST00000866625.1",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 279,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2179,
"cdna_start": 671,
"cds_end": null,
"cds_length": 840,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000866627.1",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000536686.1",
"strand": true,
"transcript": "ENST00000866627.1",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 244,
"aa_ref": "N",
"aa_start": 140,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2761,
"cdna_start": 655,
"cds_end": null,
"cds_length": 735,
"cds_start": 420,
"consequences": [
"synonymous_variant"
],
"exon_count": 9,
"exon_rank": 6,
"exon_rank_end": null,
"feature": "NM_001321758.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.420C>T",
"hgvs_p": "p.Asn140Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001308687.1",
"strand": true,
"transcript": "NM_001321758.2",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 208,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2766,
"cdna_start": 766,
"cds_end": null,
"cds_length": 627,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 10,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "NM_001321760.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001308689.1",
"strand": true,
"transcript": "NM_001321760.2",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 208,
"aa_ref": "N",
"aa_start": 177,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2595,
"cdna_start": 682,
"cds_end": null,
"cds_length": 627,
"cds_start": 531,
"consequences": [
"synonymous_variant"
],
"exon_count": 10,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000646533.1",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.531C>T",
"hgvs_p": "p.Asn177Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000494718.1",
"strand": true,
"transcript": "ENST00000646533.1",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 183,
"aa_ref": "N",
"aa_start": 79,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2578,
"cdna_start": 472,
"cds_end": null,
"cds_length": 552,
"cds_start": 237,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "NM_001290232.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.237C>T",
"hgvs_p": "p.Asn79Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001277161.1",
"strand": true,
"transcript": "NM_001290232.2",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 183,
"aa_ref": "N",
"aa_start": 79,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2826,
"cdna_start": 720,
"cds_end": null,
"cds_length": 552,
"cds_start": 237,
"consequences": [
"synonymous_variant"
],
"exon_count": 10,
"exon_rank": 7,
"exon_rank_end": null,
"feature": "NM_001321756.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.237C>T",
"hgvs_p": "p.Asn79Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_001308685.1",
"strand": true,
"transcript": "NM_001321756.2",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 183,
"aa_ref": "N",
"aa_start": 79,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2633,
"cdna_start": 527,
"cds_end": null,
"cds_length": 552,
"cds_start": 237,
"consequences": [
"synonymous_variant"
],
"exon_count": 12,
"exon_rank": 9,
"exon_rank_end": null,
"feature": "NM_032499.6",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.237C>T",
"hgvs_p": "p.Asn79Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "NP_115888.1",
"strand": true,
"transcript": "NM_032499.6",
"transcript_support_level": null
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 183,
"aa_ref": "N",
"aa_start": 79,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2578,
"cdna_start": 485,
"cds_end": null,
"cds_length": 552,
"cds_start": 237,
"consequences": [
"synonymous_variant"
],
"exon_count": 11,
"exon_rank": 8,
"exon_rank_end": null,
"feature": "ENST00000338183.8",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.237C>T",
"hgvs_p": "p.Asn79Asn",
"intron_rank": null,
"intron_rank_end": null,
"mane_plus": null,
"mane_select": null,
"protein_coding": true,
"protein_id": "ENSP00000342433.4",
"strand": true,
"transcript": "ENST00000338183.8",
"transcript_support_level": 5
},
{
"aa_alt": "N",
"aa_end": null,
"aa_length": 158,
"aa_ref": "N",
"aa_start": 54,
"biotype": "protein_coding",
"canonical": false,
"cdna_end": null,
"cdna_length": 2492,
"cdna_start": 800,
"cds_end": null,
"cds_length": 477,
"cds_start": 162,
"consequences": [
"synonymous_variant"
],
"exon_count": 13,
"exon_rank": 9,
"exon_rank_end": null,
"feature": "NM_001321757.2",
"gene_hgnc_id": 26929,
"gene_symbol": "CDIN1",
"hgvs_c": "c.162C>T",
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