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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 15-40414955-G-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=15&pos=40414955&ref=G&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "15",
"pos": 40414955,
"ref": "G",
"alt": "T",
"effect": "missense_variant",
"transcript": "ENST00000487418.8",
"consequences": [
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.851G>T",
"hgvs_p": "p.Arg284Leu",
"transcript": "NM_002225.5",
"protein_id": "NP_002216.3",
"transcript_support_level": null,
"aa_start": 284,
"aa_end": null,
"aa_length": 423,
"cds_start": 851,
"cds_end": null,
"cds_length": 1272,
"cdna_start": 884,
"cdna_end": null,
"cdna_length": 4350,
"mane_select": "ENST00000487418.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.851G>T",
"hgvs_p": "p.Arg284Leu",
"transcript": "ENST00000487418.8",
"protein_id": "ENSP00000418397.3",
"transcript_support_level": 1,
"aa_start": 284,
"aa_end": null,
"aa_length": 423,
"cds_start": 851,
"cds_end": null,
"cds_length": 1272,
"cdna_start": 884,
"cdna_end": null,
"cdna_length": 4350,
"mane_select": "NM_002225.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.761G>T",
"hgvs_p": "p.Arg254Leu",
"transcript": "ENST00000479013.7",
"protein_id": "ENSP00000417990.3",
"transcript_support_level": 1,
"aa_start": 254,
"aa_end": null,
"aa_length": 393,
"cds_start": 761,
"cds_end": null,
"cds_length": 1182,
"cdna_start": 794,
"cdna_end": null,
"cdna_length": 4251,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.851G>T",
"hgvs_p": "p.Arg284Leu",
"transcript": "NM_001354601.3",
"protein_id": "NP_001341530.2",
"transcript_support_level": null,
"aa_start": 284,
"aa_end": null,
"aa_length": 484,
"cds_start": 851,
"cds_end": null,
"cds_length": 1455,
"cdna_start": 884,
"cdna_end": null,
"cdna_length": 1702,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.938G>T",
"hgvs_p": "p.Arg313Leu",
"transcript": "NM_001354600.3",
"protein_id": "NP_001341529.2",
"transcript_support_level": null,
"aa_start": 313,
"aa_end": null,
"aa_length": 473,
"cds_start": 938,
"cds_end": null,
"cds_length": 1422,
"cdna_start": 971,
"cdna_end": null,
"cdna_length": 1871,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.938G>T",
"hgvs_p": "p.Arg313Leu",
"transcript": "NM_001354599.3",
"protein_id": "NP_001341528.2",
"transcript_support_level": null,
"aa_start": 313,
"aa_end": null,
"aa_length": 452,
"cds_start": 938,
"cds_end": null,
"cds_length": 1359,
"cdna_start": 971,
"cdna_end": null,
"cdna_length": 4437,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.851G>T",
"hgvs_p": "p.Arg284Leu",
"transcript": "NM_001354598.3",
"protein_id": "NP_001341527.2",
"transcript_support_level": null,
"aa_start": 284,
"aa_end": null,
"aa_length": 444,
"cds_start": 851,
"cds_end": null,
"cds_length": 1335,
"cdna_start": 884,
"cdna_end": null,
"cdna_length": 1784,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.860G>T",
"hgvs_p": "p.Arg287Leu",
"transcript": "ENST00000651168.1",
"protein_id": "ENSP00000499074.1",
"transcript_support_level": null,
"aa_start": 287,
"aa_end": null,
"aa_length": 426,
"cds_start": 860,
"cds_end": null,
"cds_length": 1281,
"cdna_start": 1194,
"cdna_end": null,
"cdna_length": 4665,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.803G>T",
"hgvs_p": "p.Arg268Leu",
"transcript": "NM_001354597.3",
"protein_id": "NP_001341526.1",
"transcript_support_level": null,
"aa_start": 268,
"aa_end": null,
"aa_length": 407,
"cds_start": 803,
"cds_end": null,
"cds_length": 1224,
"cdna_start": 1263,
"cdna_end": null,
"cdna_length": 4729,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.770G>T",
"hgvs_p": "p.Arg257Leu",
"transcript": "ENST00000650656.1",
"protein_id": "ENSP00000498731.1",
"transcript_support_level": null,
"aa_start": 257,
"aa_end": null,
"aa_length": 396,
"cds_start": 770,
"cds_end": null,
"cds_length": 1191,
"cdna_start": 1104,
"cdna_end": null,
"cdna_length": 4575,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.761G>T",
"hgvs_p": "p.Arg254Leu",
"transcript": "NM_001159508.3",
"protein_id": "NP_001152980.2",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 393,
"cds_start": 761,
"cds_end": null,
"cds_length": 1182,
"cdna_start": 794,
"cdna_end": null,
"cdna_length": 4260,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.608G>T",
"hgvs_p": "p.Arg203Leu",
"transcript": "ENST00000473112.6",
"protein_id": "ENSP00000417256.2",
"transcript_support_level": 5,
"aa_start": 203,
"aa_end": null,
"aa_length": 305,
"cds_start": 608,
"cds_end": null,
"cds_length": 918,
"cdna_start": 610,
"cdna_end": null,
"cdna_length": 920,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.248G>T",
"hgvs_p": "p.Arg83Leu",
"transcript": "ENST00000491554.6",
"protein_id": "ENSP00000453146.1",
"transcript_support_level": 3,
"aa_start": 83,
"aa_end": null,
"aa_length": 243,
"cds_start": 248,
"cds_end": null,
"cds_length": 732,
"cdna_start": 248,
"cdna_end": null,
"cdna_length": 1148,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.947G>T",
"hgvs_p": "p.Arg316Leu",
"transcript": "XM_017022149.2",
"protein_id": "XP_016877638.1",
"transcript_support_level": null,
"aa_start": 316,
"aa_end": null,
"aa_length": 516,
"cds_start": 947,
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"cdna_start": 971,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.890G>T",
"hgvs_p": "p.Arg297Leu",
"transcript": "XM_047432460.1",
"protein_id": "XP_047288416.1",
"transcript_support_level": null,
"aa_start": 297,
"aa_end": null,
"aa_length": 497,
"cds_start": 890,
"cds_end": null,
"cds_length": 1494,
"cdna_start": 1350,
"cdna_end": null,
"cdna_length": 2168,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.803G>T",
"hgvs_p": "p.Arg268Leu",
"transcript": "XM_047432461.1",
"protein_id": "XP_047288417.1",
"transcript_support_level": null,
"aa_start": 268,
"aa_end": null,
"aa_length": 468,
"cds_start": 803,
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"cdna_start": 1263,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.947G>T",
"hgvs_p": "p.Arg316Leu",
"transcript": "XM_017022153.2",
"protein_id": "XP_016877642.1",
"transcript_support_level": null,
"aa_start": 316,
"aa_end": null,
"aa_length": 447,
"cds_start": 947,
"cds_end": null,
"cds_length": 1344,
"cdna_start": 971,
"cdna_end": null,
"cdna_length": 1784,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.890G>T",
"hgvs_p": "p.Arg297Leu",
"transcript": "XM_017022154.3",
"protein_id": "XP_016877643.1",
"transcript_support_level": null,
"aa_start": 297,
"aa_end": null,
"aa_length": 436,
"cds_start": 890,
"cds_end": null,
"cds_length": 1311,
"cdna_start": 1350,
"cdna_end": null,
"cdna_length": 4816,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.947G>T",
"hgvs_p": "p.Arg316Leu",
"transcript": "XM_017022155.3",
"protein_id": "XP_016877644.1",
"transcript_support_level": null,
"aa_start": 316,
"aa_end": null,
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"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.860G>T",
"hgvs_p": "p.Arg287Leu",
"transcript": "XM_047432462.1",
"protein_id": "XP_047288418.1",
"transcript_support_level": null,
"aa_start": 287,
"aa_end": null,
"aa_length": 418,
"cds_start": 860,
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"cdna_start": 884,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
"aa_ref": "R",
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.860G>T",
"hgvs_p": "p.Arg287Leu",
"transcript": "XM_047432463.1",
"protein_id": "XP_047288419.1",
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"aa_start": 287,
"aa_end": null,
"aa_length": 389,
"cds_start": 860,
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"cdna_start": 884,
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"cdna_length": 3300,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.947G>T",
"hgvs_p": "p.Arg316Leu",
"transcript": "XM_017022157.2",
"protein_id": "XP_016877646.1",
"transcript_support_level": null,
"aa_start": 316,
"aa_end": null,
"aa_length": 376,
"cds_start": 947,
"cds_end": null,
"cds_length": 1131,
"cdna_start": 971,
"cdna_end": null,
"cdna_length": 1611,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IVD",
"gene_hgnc_id": 6186,
"hgvs_c": "c.803G>T",
"hgvs_p": "p.Arg268Leu",
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}