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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 15-41380186-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=15&pos=41380186&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "15",
"pos": 41380186,
"ref": "A",
"alt": "G",
"effect": "stop_retained_variant",
"transcript": "NM_016359.5",
"consequences": [
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1326A>G",
"hgvs_p": "p.Ter442Ter",
"transcript": "NM_016359.5",
"protein_id": "NP_057443.2",
"transcript_support_level": null,
"aa_start": 442,
"aa_end": null,
"aa_length": 441,
"cds_start": 1326,
"cds_end": null,
"cds_length": 1326,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000559596.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_016359.5"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1326A>G",
"hgvs_p": "p.Ter442Ter",
"transcript": "ENST00000559596.6",
"protein_id": "ENSP00000453403.1",
"transcript_support_level": 1,
"aa_start": 442,
"aa_end": null,
"aa_length": 441,
"cds_start": 1326,
"cds_end": null,
"cds_length": 1326,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_016359.5",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000559596.6"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENSG00000285920",
"gene_hgnc_id": null,
"hgvs_c": "c.1326A>G",
"hgvs_p": "p.Ter442Ter",
"transcript": "ENST00000661438.1",
"protein_id": "ENSP00000499503.1",
"transcript_support_level": null,
"aa_start": 442,
"aa_end": null,
"aa_length": 441,
"cds_start": 1326,
"cds_end": null,
"cds_length": 1326,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000661438.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1323A>G",
"hgvs_p": "p.Ter441Ter",
"transcript": "ENST00000414849.6",
"protein_id": "ENSP00000400746.2",
"transcript_support_level": 1,
"aa_start": 441,
"aa_end": null,
"aa_length": 440,
"cds_start": 1323,
"cds_end": null,
"cds_length": 1323,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000414849.6"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1323A>G",
"hgvs_p": "p.Ter441Ter",
"transcript": "ENST00000560177.5",
"protein_id": "ENSP00000453657.1",
"transcript_support_level": 1,
"aa_start": 441,
"aa_end": null,
"aa_length": 440,
"cds_start": 1323,
"cds_end": null,
"cds_length": 1323,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000560177.5"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1320A>G",
"hgvs_p": "p.Ter440Ter",
"transcript": "ENST00000560747.5",
"protein_id": "ENSP00000454097.1",
"transcript_support_level": 1,
"aa_start": 440,
"aa_end": null,
"aa_length": 439,
"cds_start": 1320,
"cds_end": null,
"cds_length": 1320,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000560747.5"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1281A>G",
"hgvs_p": "p.Ter427Ter",
"transcript": "ENST00000260359.10",
"protein_id": "ENSP00000260359.6",
"transcript_support_level": 1,
"aa_start": 427,
"aa_end": null,
"aa_length": 426,
"cds_start": 1281,
"cds_end": null,
"cds_length": 1281,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000260359.10"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1344A>G",
"hgvs_p": "p.Ter448Ter",
"transcript": "ENST00000891646.1",
"protein_id": "ENSP00000561705.1",
"transcript_support_level": null,
"aa_start": 448,
"aa_end": null,
"aa_length": 447,
"cds_start": 1344,
"cds_end": null,
"cds_length": 1344,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000891646.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1341A>G",
"hgvs_p": "p.Ter447Ter",
"transcript": "ENST00000891642.1",
"protein_id": "ENSP00000561701.1",
"transcript_support_level": null,
"aa_start": 447,
"aa_end": null,
"aa_length": 446,
"cds_start": 1341,
"cds_end": null,
"cds_length": 1341,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000891642.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1341A>G",
"hgvs_p": "p.Ter447Ter",
"transcript": "ENST00000963300.1",
"protein_id": "ENSP00000633359.1",
"transcript_support_level": null,
"aa_start": 447,
"aa_end": null,
"aa_length": 446,
"cds_start": 1341,
"cds_end": null,
"cds_length": 1341,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000963300.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1326A>G",
"hgvs_p": "p.Ter442Ter",
"transcript": "ENST00000668273.1",
"protein_id": "ENSP00000499238.1",
"transcript_support_level": null,
"aa_start": 442,
"aa_end": null,
"aa_length": 441,
"cds_start": 1326,
"cds_end": null,
"cds_length": 1326,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000668273.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1323A>G",
"hgvs_p": "p.Ter441Ter",
"transcript": "NM_001301136.2",
"protein_id": "NP_001288065.1",
"transcript_support_level": null,
"aa_start": 441,
"aa_end": null,
"aa_length": 440,
"cds_start": 1323,
"cds_end": null,
"cds_length": 1323,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001301136.2"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1323A>G",
"hgvs_p": "p.Ter441Ter",
"transcript": "NM_018454.8",
"protein_id": "NP_060924.4",
"transcript_support_level": null,
"aa_start": 441,
"aa_end": null,
"aa_length": 440,
"cds_start": 1323,
"cds_end": null,
"cds_length": 1323,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_018454.8"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1320A>G",
"hgvs_p": "p.Ter440Ter",
"transcript": "NM_001243142.2",
"protein_id": "NP_001230071.1",
"transcript_support_level": null,
"aa_start": 440,
"aa_end": null,
"aa_length": 439,
"cds_start": 1320,
"cds_end": null,
"cds_length": 1320,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001243142.2"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1299A>G",
"hgvs_p": "p.Ter433Ter",
"transcript": "ENST00000891645.1",
"protein_id": "ENSP00000561704.1",
"transcript_support_level": null,
"aa_start": 433,
"aa_end": null,
"aa_length": 432,
"cds_start": 1299,
"cds_end": null,
"cds_length": 1299,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000891645.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1281A>G",
"hgvs_p": "p.Ter427Ter",
"transcript": "NM_001243143.2",
"protein_id": "NP_001230072.1",
"transcript_support_level": null,
"aa_start": 427,
"aa_end": null,
"aa_length": 426,
"cds_start": 1281,
"cds_end": null,
"cds_length": 1281,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001243143.2"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1278A>G",
"hgvs_p": "p.Ter426Ter",
"transcript": "ENST00000891639.1",
"protein_id": "ENSP00000561698.1",
"transcript_support_level": null,
"aa_start": 426,
"aa_end": null,
"aa_length": 425,
"cds_start": 1278,
"cds_end": null,
"cds_length": 1278,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000891639.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1257A>G",
"hgvs_p": "p.Ter419Ter",
"transcript": "ENST00000891644.1",
"protein_id": "ENSP00000561703.1",
"transcript_support_level": null,
"aa_start": 419,
"aa_end": null,
"aa_length": 418,
"cds_start": 1257,
"cds_end": null,
"cds_length": 1257,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000891644.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1254A>G",
"hgvs_p": "p.Ter418Ter",
"transcript": "ENST00000924131.1",
"protein_id": "ENSP00000594190.1",
"transcript_support_level": null,
"aa_start": 418,
"aa_end": null,
"aa_length": 417,
"cds_start": 1254,
"cds_end": null,
"cds_length": 1254,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000924131.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1254A>G",
"hgvs_p": "p.Ter418Ter",
"transcript": "ENST00000924133.1",
"protein_id": "ENSP00000594192.1",
"transcript_support_level": null,
"aa_start": 418,
"aa_end": null,
"aa_length": 417,
"cds_start": 1254,
"cds_end": null,
"cds_length": 1254,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000924133.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1212A>G",
"hgvs_p": "p.Ter404Ter",
"transcript": "ENST00000924132.1",
"protein_id": "ENSP00000594191.1",
"transcript_support_level": null,
"aa_start": 404,
"aa_end": null,
"aa_length": 403,
"cds_start": 1212,
"cds_end": null,
"cds_length": 1212,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000924132.1"
},
{
"aa_ref": "*",
"aa_alt": "*",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"stop_retained_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NUSAP1",
"gene_hgnc_id": 18538,
"hgvs_c": "c.1209A>G",
"hgvs_p": "p.Ter403Ter",
"transcript": "ENST00000891641.1",
"protein_id": "ENSP00000561700.1",
"transcript_support_level": null,
"aa_start": 403,
"aa_end": null,
"aa_length": 402,
"cds_start": 1209,
"cds_end": null,
"cds_length": 1209,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
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{
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{
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}
],
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}