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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 15-55319267-G-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=15&pos=55319267&ref=G&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "15",
      "pos": 55319267,
      "ref": "G",
      "alt": "T",
      "effect": "missense_variant",
      "transcript": "NM_004855.5",
      "consequences": [
        {
          "aa_ref": "S",
          "aa_alt": "I",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile",
          "transcript": "NM_004855.5",
          "protein_id": "NP_004846.4",
          "transcript_support_level": null,
          "aa_start": 6,
          "aa_end": null,
          "aa_length": 554,
          "cds_start": 17,
          "cds_end": null,
          "cds_length": 1665,
          "cdna_start": 46,
          "cdna_end": null,
          "cdna_length": 1910,
          "mane_select": "ENST00000164305.10",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "I",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile",
          "transcript": "ENST00000164305.10",
          "protein_id": "ENSP00000164305.5",
          "transcript_support_level": 1,
          "aa_start": 6,
          "aa_end": null,
          "aa_length": 554,
          "cds_start": 17,
          "cds_end": null,
          "cds_length": 1665,
          "cdna_start": 46,
          "cdna_end": null,
          "cdna_length": 1910,
          "mane_select": "NM_004855.5",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "I",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile",
          "transcript": "ENST00000566999.5",
          "protein_id": "ENSP00000456531.1",
          "transcript_support_level": 3,
          "aa_start": 6,
          "aa_end": null,
          "aa_length": 254,
          "cds_start": 17,
          "cds_end": null,
          "cds_length": 767,
          "cdna_start": 23,
          "cdna_end": null,
          "cdna_length": 773,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "I",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile",
          "transcript": "ENST00000539642.5",
          "protein_id": "ENSP00000438963.2",
          "transcript_support_level": 5,
          "aa_start": 6,
          "aa_end": null,
          "aa_length": 555,
          "cds_start": 17,
          "cds_end": null,
          "cds_length": 1668,
          "cdna_start": 17,
          "cdna_end": null,
          "cdna_length": 1668,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "I",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile",
          "transcript": "XM_011522235.4",
          "protein_id": "XP_011520537.1",
          "transcript_support_level": null,
          "aa_start": 6,
          "aa_end": null,
          "aa_length": 539,
          "cds_start": 17,
          "cds_end": null,
          "cds_length": 1620,
          "cdna_start": 46,
          "cdna_end": null,
          "cdna_length": 1865,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "I",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile",
          "transcript": "XM_011522236.4",
          "protein_id": "XP_011520538.1",
          "transcript_support_level": null,
          "aa_start": 6,
          "aa_end": null,
          "aa_length": 519,
          "cds_start": 17,
          "cds_end": null,
          "cds_length": 1560,
          "cdna_start": 46,
          "cdna_end": null,
          "cdna_length": 1805,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "I",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile",
          "transcript": "XM_047433365.1",
          "protein_id": "XP_047289321.1",
          "transcript_support_level": null,
          "aa_start": 6,
          "aa_end": null,
          "aa_length": 382,
          "cds_start": 17,
          "cds_end": null,
          "cds_length": 1149,
          "cdna_start": 46,
          "cdna_end": null,
          "cdna_length": 1337,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "n.17G>T",
          "hgvs_p": null,
          "transcript": "ENST00000565367.5",
          "protein_id": "ENSP00000455943.1",
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1812,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "n.36G>T",
          "hgvs_p": null,
          "transcript": "ENST00000569909.1",
          "protein_id": null,
          "transcript_support_level": 4,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 579,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "n.17G>T",
          "hgvs_p": null,
          "transcript": "ENST00000570059.1",
          "protein_id": "ENSP00000456285.1",
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 582,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "5_prime_UTR_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.-184G>T",
          "hgvs_p": null,
          "transcript": "XM_011522237.3",
          "protein_id": "XP_011520539.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 421,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1266,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1711,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "5_prime_UTR_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.-345G>T",
          "hgvs_p": null,
          "transcript": "XM_047433363.1",
          "protein_id": "XP_047289319.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 421,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1266,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1872,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "5_prime_UTR_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.-213G>T",
          "hgvs_p": null,
          "transcript": "XM_005254795.6",
          "protein_id": "XP_005254852.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 393,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1182,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1656,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "5_prime_UTR_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "c.-374G>T",
          "hgvs_p": null,
          "transcript": "XM_047433364.1",
          "protein_id": "XP_047289320.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 393,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1182,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1817,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGBOS1",
          "gene_hgnc_id": 50696,
          "hgvs_c": "c.-479C>A",
          "hgvs_p": null,
          "transcript": "NM_001308421.2",
          "protein_id": "NP_001295350.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 54,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 165,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 944,
          "mane_select": "ENST00000436697.3",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGBOS1",
          "gene_hgnc_id": 50696,
          "hgvs_c": "c.-479C>A",
          "hgvs_p": null,
          "transcript": "ENST00000436697.3",
          "protein_id": "ENSP00000484893.1",
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 54,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 165,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 944,
          "mane_select": "NM_001308421.2",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "RAB27A",
          "gene_hgnc_id": 9766,
          "hgvs_c": "c.-568C>A",
          "hgvs_p": null,
          "transcript": "NM_001438970.1",
          "protein_id": "NP_001425899.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 221,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 666,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3631,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "RAB27A",
          "gene_hgnc_id": 9766,
          "hgvs_c": "c.-570C>A",
          "hgvs_p": null,
          "transcript": "ENST00000563262.5",
          "protein_id": "ENSP00000457595.1",
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 94,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 286,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 702,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGBOS1",
          "gene_hgnc_id": 50696,
          "hgvs_c": "c.-436C>A",
          "hgvs_p": null,
          "transcript": "NM_001308422.2",
          "protein_id": "NP_001295351.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 54,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 165,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 901,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGBOS1",
          "gene_hgnc_id": 50696,
          "hgvs_c": "c.-412C>A",
          "hgvs_p": null,
          "transcript": "NM_001308423.2",
          "protein_id": "NP_001295352.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 54,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 165,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 877,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGBOS1",
          "gene_hgnc_id": 50696,
          "hgvs_c": "c.-436C>A",
          "hgvs_p": null,
          "transcript": "ENST00000567948.1",
          "protein_id": "ENSP00000482636.1",
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 54,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 165,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 801,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGBOS1",
          "gene_hgnc_id": 50696,
          "hgvs_c": "c.-442C>A",
          "hgvs_p": null,
          "transcript": "ENST00000565225.1",
          "protein_id": "ENSP00000481097.1",
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 28,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 89,
          "cdna_start": null,
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          "cdna_length": 371,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "RAB27A",
          "gene_hgnc_id": 9766,
          "hgvs_c": "n.-157C>A",
          "hgvs_p": null,
          "transcript": "ENST00000561545.1",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 830,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGB",
          "gene_hgnc_id": 8959,
          "hgvs_c": "n.-6G>T",
          "hgvs_p": null,
          "transcript": "ENST00000566072.1",
          "protein_id": null,
          "transcript_support_level": 4,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 555,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 2,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PIGBOS1",
          "gene_hgnc_id": 50696,
          "hgvs_c": "c.-515C>A",
          "hgvs_p": null,
          "transcript": "XM_047432079.1",
          "protein_id": "XP_047288035.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 54,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 165,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 980,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "PIGB",
      "gene_hgnc_id": 8959,
      "dbsnp": "rs1053532065",
      "frequency_reference_population": 0.0000018665817,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 3,
      "gnomad_exomes_af": 0.0000013746,
      "gnomad_genomes_af": 0.00000656849,
      "gnomad_exomes_ac": 2,
      "gnomad_genomes_ac": 1,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.10370999574661255,
      "computational_prediction_selected": "Benign",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.044,
      "revel_prediction": "Benign",
      "alphamissense_score": 0.1284,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.3,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 0.545,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": 0,
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PM2,BP4_Moderate",
      "acmg_by_gene": [
        {
          "score": 0,
          "benign_score": 2,
          "pathogenic_score": 2,
          "criteria": [
            "PM2",
            "BP4_Moderate"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "NM_004855.5",
          "gene_symbol": "PIGB",
          "hgnc_id": 8959,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.17G>T",
          "hgvs_p": "p.Ser6Ile"
        },
        {
          "score": 0,
          "benign_score": 2,
          "pathogenic_score": 2,
          "criteria": [
            "PM2",
            "BP4_Moderate"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "NM_001308421.2",
          "gene_symbol": "PIGBOS1",
          "hgnc_id": 50696,
          "effects": [
            "upstream_gene_variant"
          ],
          "inheritance_mode": "",
          "hgvs_c": "c.-479C>A",
          "hgvs_p": null
        },
        {
          "score": 0,
          "benign_score": 2,
          "pathogenic_score": 2,
          "criteria": [
            "PM2",
            "BP4_Moderate"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "NM_001438970.1",
          "gene_symbol": "RAB27A",
          "hgnc_id": 9766,
          "effects": [
            "upstream_gene_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.-568C>A",
          "hgvs_p": null
        }
      ],
      "clinvar_disease": "not provided",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "US:1",
      "phenotype_combined": "not provided",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}