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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 15-65513051-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=15&pos=65513051&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "15",
"pos": 65513051,
"ref": "T",
"alt": "C",
"effect": "intron_variant",
"transcript": "ENST00000300141.11",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.-11-487A>G",
"hgvs_p": null,
"transcript": "NM_130434.5",
"protein_id": "NP_569118.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 882,
"cds_start": -4,
"cds_end": null,
"cds_length": 2649,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7281,
"mane_select": "ENST00000300141.11",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.-11-487A>G",
"hgvs_p": null,
"transcript": "ENST00000300141.11",
"protein_id": "ENSP00000300141.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 882,
"cds_start": -4,
"cds_end": null,
"cds_length": 2649,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7281,
"mane_select": "NM_130434.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.38-487A>G",
"hgvs_p": null,
"transcript": "ENST00000321147.10",
"protein_id": "ENSP00000318111.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 847,
"cds_start": -4,
"cds_end": null,
"cds_length": 2544,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3125,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.38-487A>G",
"hgvs_p": null,
"transcript": "NM_001320875.2",
"protein_id": "NP_001307804.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": -4,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7417,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.38-487A>G",
"hgvs_p": null,
"transcript": "NM_197960.4",
"protein_id": "NP_932064.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": -4,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7282,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.38-487A>G",
"hgvs_p": null,
"transcript": "ENST00000341861.9",
"protein_id": "ENSP00000339208.5",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": -4,
"cds_end": null,
"cds_length": 2697,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 8699,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.38-487A>G",
"hgvs_p": null,
"transcript": "ENST00000559233.5",
"protein_id": "ENSP00000453954.1",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": 898,
"cds_start": -4,
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"cds_length": 2697,
"cdna_start": null,
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"cdna_length": 2953,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.-11-487A>G",
"hgvs_p": null,
"transcript": "NM_001320876.2",
"protein_id": "NP_001307805.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 882,
"cds_start": -4,
"cds_end": null,
"cds_length": 2649,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 7386,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "DPP8",
"gene_hgnc_id": 16490,
"hgvs_c": "c.38-487A>G",
"hgvs_p": null,
"transcript": "NM_001438667.1",
"protein_id": "NP_001425596.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 855,
"cds_start": -4,
"cds_end": null,
"cds_length": 2568,
"cdna_start": null,
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"cdna_length": 7288,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 20,
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"gene_symbol": "DPP8",
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"hgvs_c": "c.38-487A>G",
"hgvs_p": null,
"transcript": "NM_197961.4",
"protein_id": "NP_932065.1",
"transcript_support_level": null,
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"cds_start": -4,
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"feature": null
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 20,
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"gene_symbol": "DPP8",
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"hgvs_c": "c.38-487A>G",
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"transcript": "NM_001438668.1",
"protein_id": "NP_001425597.1",
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},
{
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],
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},
{
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],
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},
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],
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"gene_symbol": "DPP8",
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],
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},
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],
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},
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],
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"hgvs_c": "c.38-487A>G",
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],
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"hgvs_c": "c.-11-487A>G",
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"transcript": "ENST00000560665.1",
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},
{
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"strand": false,
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],
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"exon_count": 21,
"intron_rank": 1,
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"gene_symbol": "DPP8",
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"hgvs_c": "n.38-487A>G",
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"transcript": "ENST00000395652.7",
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