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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 16-1519960-T-TCTTGGC (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=16&pos=1519960&ref=T&alt=TCTTGGC&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "16",
"pos": 1519960,
"ref": "T",
"alt": "TCTTGGC",
"effect": "conservative_inframe_insertion",
"transcript": "NM_014714.4",
"consequences": [
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "NM_014714.4",
"protein_id": "NP_055529.2",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000426508.7",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_014714.4"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "ENST00000426508.7",
"protein_id": "ENSP00000406012.2",
"transcript_support_level": 5,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_014714.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000426508.7"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.1537_1542dupGCCAAG",
"hgvs_p": "p.Lys514_Ser515insAlaLys",
"transcript": "ENST00000361339.9",
"protein_id": "ENSP00000354895.5",
"transcript_support_level": 1,
"aa_start": 514,
"aa_end": null,
"aa_length": 656,
"cds_start": 1542,
"cds_end": null,
"cds_length": 1971,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000361339.9"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "ENST00000889170.1",
"protein_id": "ENSP00000559229.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000889170.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "ENST00000962400.1",
"protein_id": "ENSP00000632459.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000962400.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "ENST00000962401.1",
"protein_id": "ENSP00000632460.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000962401.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "ENST00000962402.1",
"protein_id": "ENSP00000632461.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000962402.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3892_3897dupGCCAAG",
"hgvs_p": "p.Lys1299_Ser1300insAlaLys",
"transcript": "ENST00000889168.1",
"protein_id": "ENSP00000559227.1",
"transcript_support_level": null,
"aa_start": 1299,
"aa_end": null,
"aa_length": 1441,
"cds_start": 3897,
"cds_end": null,
"cds_length": 4326,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000889168.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3841_3846dupGCCAAG",
"hgvs_p": "p.Lys1282_Ser1283insAlaLys",
"transcript": "ENST00000889169.1",
"protein_id": "ENSP00000559228.1",
"transcript_support_level": null,
"aa_start": 1282,
"aa_end": null,
"aa_length": 1424,
"cds_start": 3846,
"cds_end": null,
"cds_length": 4275,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000889169.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3841_3846dupGCCAAG",
"hgvs_p": "p.Lys1282_Ser1283insAlaLys",
"transcript": "ENST00000914239.1",
"protein_id": "ENSP00000584298.1",
"transcript_support_level": null,
"aa_start": 1282,
"aa_end": null,
"aa_length": 1424,
"cds_start": 3846,
"cds_end": null,
"cds_length": 4275,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000914239.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.73_78dupGCCAAG",
"hgvs_p": "p.Lys26_Ser27insAlaLys",
"transcript": "ENST00000568837.1",
"protein_id": "ENSP00000458439.1",
"transcript_support_level": 3,
"aa_start": 26,
"aa_end": null,
"aa_length": 125,
"cds_start": 78,
"cds_end": null,
"cds_length": 378,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000568837.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "XM_006720990.4",
"protein_id": "XP_006721053.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_006720990.4"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "XM_006720991.4",
"protein_id": "XP_006721054.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_006720991.4"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "XM_047434965.1",
"protein_id": "XP_047290921.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047434965.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "XM_047434966.1",
"protein_id": "XP_047290922.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047434966.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "XM_047434967.1",
"protein_id": "XP_047290923.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047434967.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "XM_047434968.1",
"protein_id": "XP_047290924.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047434968.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys",
"transcript": "XM_047434969.1",
"protein_id": "XP_047290925.1",
"transcript_support_level": null,
"aa_start": 1320,
"aa_end": null,
"aa_length": 1462,
"cds_start": 3960,
"cds_end": null,
"cds_length": 4389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047434969.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.3709_3714dupGCCAAG",
"hgvs_p": "p.Lys1238_Ser1239insAlaLys",
"transcript": "XM_047434970.1",
"protein_id": "XP_047290926.1",
"transcript_support_level": null,
"aa_start": 1238,
"aa_end": null,
"aa_length": 1380,
"cds_start": 3714,
"cds_end": null,
"cds_length": 4143,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_047434970.1"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.2980_2985dupGCCAAG",
"hgvs_p": "p.Lys995_Ser996insAlaLys",
"transcript": "XM_011522767.2",
"protein_id": "XP_011521069.1",
"transcript_support_level": null,
"aa_start": 995,
"aa_end": null,
"aa_length": 1137,
"cds_start": 2985,
"cds_end": null,
"cds_length": 3414,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_011522767.2"
},
{
"aa_ref": "K",
"aa_alt": "KAK",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"conservative_inframe_insertion"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "c.2140_2145dupGCCAAG",
"hgvs_p": "p.Lys715_Ser716insAlaLys",
"transcript": "XM_047434971.1",
"protein_id": "XP_047290927.1",
"transcript_support_level": null,
"aa_start": 715,
"aa_end": null,
"aa_length": 857,
"cds_start": 2145,
"cds_end": null,
"cds_length": 2574,
"cdna_start": null,
"cdna_end": null,
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"biotype": "protein_coding",
"feature": "XM_047434971.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": 11,
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"exon_count": 13,
"intron_rank": null,
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"gene_hgnc_id": 29077,
"hgvs_c": "c.1588_1593dupGCCAAG",
"hgvs_p": "p.Lys531_Ser532insAlaLys",
"transcript": "XM_006720992.4",
"protein_id": "XP_006721055.1",
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"aa_start": 531,
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"cds_end": null,
"cds_length": 2022,
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"cdna_length": null,
"mane_select": null,
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"biotype": "protein_coding",
"feature": "XM_006720992.4"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 22,
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"exon_count": 24,
"intron_rank": null,
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"gene_symbol": "IFT140",
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"hgvs_c": "n.*2393_*2398dupGCCAAG",
"hgvs_p": null,
"transcript": "ENST00000397417.6",
"protein_id": "ENSP00000380562.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000397417.6"
},
{
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"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "n.3779_3784dupGCCAAG",
"hgvs_p": null,
"transcript": "ENST00000565298.5",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000565298.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"hgvs_c": "n.*2393_*2398dupGCCAAG",
"hgvs_p": null,
"transcript": "ENST00000397417.6",
"protein_id": "ENSP00000380562.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000397417.6"
}
],
"gene_symbol": "IFT140",
"gene_hgnc_id": 29077,
"dbsnp": "rs746697405",
"frequency_reference_population": 0.000008711766,
"hom_count_reference_population": 0,
"allele_count_reference_population": 14,
"gnomad_exomes_af": 0.00000756129,
"gnomad_genomes_af": 0.0000197052,
"gnomad_exomes_ac": 11,
"gnomad_genomes_ac": 3,
"gnomad_exomes_homalt": 0,
"gnomad_genomes_homalt": 0,
"gnomad_mito_homoplasmic": null,
"gnomad_mito_heteroplasmic": null,
"computational_score_selected": null,
"computational_prediction_selected": null,
"computational_source_selected": null,
"splice_score_selected": null,
"splice_prediction_selected": null,
"splice_source_selected": null,
"revel_score": null,
"revel_prediction": null,
"alphamissense_score": null,
"alphamissense_prediction": null,
"bayesdelnoaf_score": null,
"bayesdelnoaf_prediction": null,
"phylop100way_score": 0.414,
"phylop100way_prediction": "Benign",
"spliceai_max_score": null,
"spliceai_max_prediction": null,
"dbscsnv_ada_score": null,
"dbscsnv_ada_prediction": null,
"apogee2_score": null,
"apogee2_prediction": null,
"mitotip_score": null,
"mitotip_prediction": null,
"acmg_score": -1,
"acmg_classification": "Likely_benign",
"acmg_criteria": "BP3",
"acmg_by_gene": [
{
"score": -1,
"benign_score": 1,
"pathogenic_score": 0,
"criteria": [
"BP3"
],
"verdict": "Likely_benign",
"transcript": "NM_014714.4",
"gene_symbol": "IFT140",
"hgnc_id": 29077,
"effects": [
"conservative_inframe_insertion"
],
"inheritance_mode": "AD,AR",
"hgvs_c": "c.3955_3960dupGCCAAG",
"hgvs_p": "p.Lys1320_Ser1321insAlaLys"
}
],
"clinvar_disease": "Retinitis pigmentosa 80,Saldino-Mainzer syndrome",
"clinvar_classification": "Uncertain significance",
"clinvar_review_status": "criteria provided, multiple submitters, no conflicts",
"clinvar_submissions_summary": "US:2",
"phenotype_combined": "Saldino-Mainzer syndrome|Retinitis pigmentosa 80;Saldino-Mainzer syndrome",
"pathogenicity_classification_combined": "Uncertain significance",
"custom_annotations": null
}
],
"message": null
}