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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 16-24799360-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=16&pos=24799360&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "16",
"pos": 24799360,
"ref": "C",
"alt": "T",
"effect": "intron_variant",
"transcript": "NM_014494.4",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3694+1394C>T",
"hgvs_p": null,
"transcript": "NM_014494.4",
"protein_id": "NP_055309.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1962,
"cds_start": null,
"cds_end": null,
"cds_length": 5889,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000395799.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_014494.4"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3694+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000395799.8",
"protein_id": "ENSP00000379144.3",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1962,
"cds_start": null,
"cds_end": null,
"cds_length": 5889,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_014494.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000395799.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "n.*3219+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000491718.5",
"protein_id": "ENSP00000460688.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000491718.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3721+1394C>T",
"hgvs_p": null,
"transcript": "NM_001351850.2",
"protein_id": "NP_001338779.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1922,
"cds_start": null,
"cds_end": null,
"cds_length": 5769,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001351850.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3559+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000949507.1",
"protein_id": "ENSP00000619566.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1917,
"cds_start": null,
"cds_end": null,
"cds_length": 5754,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000949507.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3694+1394C>T",
"hgvs_p": null,
"transcript": "NM_001330520.3",
"protein_id": "NP_001317449.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1913,
"cds_start": null,
"cds_end": null,
"cds_length": 5742,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001330520.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3694+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000315183.11",
"protein_id": "ENSP00000326900.7",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1913,
"cds_start": null,
"cds_end": null,
"cds_length": 5742,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000315183.11"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3694+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000938483.1",
"protein_id": "ENSP00000608542.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1890,
"cds_start": null,
"cds_end": null,
"cds_length": 5673,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938483.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3559+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000938484.1",
"protein_id": "ENSP00000608543.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1868,
"cds_start": null,
"cds_end": null,
"cds_length": 5607,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938484.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3484+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000938481.1",
"protein_id": "ENSP00000608540.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1843,
"cds_start": null,
"cds_end": null,
"cds_length": 5532,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938481.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3517+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000938482.1",
"protein_id": "ENSP00000608541.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1831,
"cds_start": null,
"cds_end": null,
"cds_length": 5496,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938482.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3517+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000938485.1",
"protein_id": "ENSP00000608544.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1780,
"cds_start": null,
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"cds_length": 5343,
"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000938485.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3268+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000895467.1",
"protein_id": "ENSP00000565526.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1771,
"cds_start": null,
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"cds_length": 5316,
"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000895467.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 18,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.673+1394C>T",
"hgvs_p": null,
"transcript": "ENST00000450465.6",
"protein_id": "ENSP00000404278.2",
"transcript_support_level": 2,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000450465.6"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3721+1394C>T",
"hgvs_p": null,
"transcript": "XM_024450231.2",
"protein_id": "XP_024305999.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1971,
"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "XM_024450231.2"
},
{
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"protein_coding": true,
"strand": true,
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],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 10,
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"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3688+1394C>T",
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"transcript": "XM_017023144.3",
"protein_id": "XP_016878633.1",
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "XM_017023144.3"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3661+1394C>T",
"hgvs_p": null,
"transcript": "XM_047433910.1",
"protein_id": "XP_047289866.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "XM_047433910.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 11,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3721+1394C>T",
"hgvs_p": null,
"transcript": "XM_017023145.3",
"protein_id": "XP_016878634.1",
"transcript_support_level": null,
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3646+1394C>T",
"hgvs_p": null,
"transcript": "XM_017023146.2",
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"feature": "XM_017023146.2"
},
{
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"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3613+1394C>T",
"hgvs_p": null,
"transcript": "XM_047433911.1",
"protein_id": "XP_047289867.1",
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"feature": "XM_047433911.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3544+1394C>T",
"hgvs_p": null,
"transcript": "XM_017023148.3",
"protein_id": "XP_016878637.1",
"transcript_support_level": null,
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"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_017023148.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 10,
"intron_rank_end": null,
"gene_symbol": "TNRC6A",
"gene_hgnc_id": 11969,
"hgvs_c": "c.3688+1394C>T",
"hgvs_p": null,
"transcript": "XM_024450232.2",
"protein_id": "XP_024306000.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cds_length": 5736,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_024450232.2"
},
{
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