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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 17-45415735-G-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=17&pos=45415735&ref=G&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "17",
"pos": 45415735,
"ref": "G",
"alt": "A",
"effect": "intron_variant",
"transcript": "ENST00000685559.1",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.658-9652C>T",
"hgvs_p": null,
"transcript": "NM_001282290.2",
"protein_id": "NP_001269219.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 889,
"cds_start": -4,
"cds_end": null,
"cds_length": 2670,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4621,
"mane_select": "ENST00000685559.1",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.658-9652C>T",
"hgvs_p": null,
"transcript": "ENST00000685559.1",
"protein_id": "ENSP00000509127.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 889,
"cds_start": -4,
"cds_end": null,
"cds_length": 2670,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4621,
"mane_select": "NM_001282290.2",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.658-9652C>T",
"hgvs_p": null,
"transcript": "NM_001385384.1",
"protein_id": "NP_001372313.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 867,
"cds_start": -4,
"cds_end": null,
"cds_length": 2604,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4555,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.658-9652C>T",
"hgvs_p": null,
"transcript": "ENST00000532891.6",
"protein_id": "ENSP00000433942.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 867,
"cds_start": -4,
"cds_end": null,
"cds_length": 2604,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2604,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.-366-9652C>T",
"hgvs_p": null,
"transcript": "NM_001385393.1",
"protein_id": "NP_001372322.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 553,
"cds_start": -4,
"cds_end": null,
"cds_length": 1662,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3646,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.-366-9652C>T",
"hgvs_p": null,
"transcript": "NM_199282.3",
"protein_id": "NP_954976.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 548,
"cds_start": -4,
"cds_end": null,
"cds_length": 1647,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3631,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.-366-9652C>T",
"hgvs_p": null,
"transcript": "ENST00000376922.6",
"protein_id": "ENSP00000366121.2",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": 548,
"cds_start": -4,
"cds_end": null,
"cds_length": 1647,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3628,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.-366-9652C>T",
"hgvs_p": null,
"transcript": "NM_001385394.1",
"protein_id": "NP_001372323.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 526,
"cds_start": -4,
"cds_end": null,
"cds_length": 1581,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3565,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.-366-9652C>T",
"hgvs_p": null,
"transcript": "NM_001385395.1",
"protein_id": "NP_001372324.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 496,
"cds_start": -4,
"cds_end": null,
"cds_length": 1491,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3648,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.-366-9652C>T",
"hgvs_p": null,
"transcript": "NM_001385396.1",
"protein_id": "NP_001372325.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 493,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "c.-387-9652C>T",
"hgvs_p": null,
"transcript": "NM_001385397.1",
"protein_id": "NP_001372326.1",
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"cds_start": -4,
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 16,
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"gene_symbol": "ARHGAP27",
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"hgvs_c": "c.-387-9652C>T",
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"transcript": "NM_001385398.1",
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 8,
"intron_rank": 1,
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"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "n.-366-9652C>T",
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"transcript": "ENST00000524404.5",
"protein_id": "ENSP00000431722.1",
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},
{
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],
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"gene_symbol": "ARHGAP27",
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"hgvs_c": "n.103-9652C>T",
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},
{
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],
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"gene_symbol": "ARHGAP27",
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"transcript": "ENST00000531735.5",
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},
{
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"consequences": [
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],
"exon_rank": null,
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"intron_rank": 2,
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"gene_symbol": "ARHGAP27",
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"hgvs_c": "n.795-9652C>T",
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},
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],
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"gene_symbol": "ARHGAP27",
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},
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],
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"gene_symbol": "ARHGAP27",
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"hgvs_c": "n.71-9652C>T",
"hgvs_p": null,
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},
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],
"exon_rank": null,
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"exon_count": 16,
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"gene_symbol": "ARHGAP27",
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"hgvs_c": "n.71-9652C>T",
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],
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],
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],
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"gene_symbol": "ARHGAP27",
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},
{
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"strand": false,
"consequences": [
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],
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"exon_count": 18,
"intron_rank": 1,
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"gene_symbol": "ARHGAP27",
"gene_hgnc_id": 31813,
"hgvs_c": "n.71-9652C>T",
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},
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"protein_coding": false,
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"consequences": [
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