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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 17-4972328-C-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=17&pos=4972328&ref=C&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "17",
"pos": 4972328,
"ref": "C",
"alt": "G",
"effect": "missense_variant",
"transcript": "NM_001171167.2",
"consequences": [
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2712G>C",
"hgvs_p": "p.Lys904Asn",
"transcript": "NM_015099.4",
"protein_id": "NP_055914.2",
"transcript_support_level": null,
"aa_start": 904,
"aa_end": null,
"aa_length": 1202,
"cds_start": 2712,
"cds_end": null,
"cds_length": 3609,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000348066.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_015099.4"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2712G>C",
"hgvs_p": "p.Lys904Asn",
"transcript": "ENST00000348066.8",
"protein_id": "ENSP00000321813.7",
"transcript_support_level": 1,
"aa_start": 904,
"aa_end": null,
"aa_length": 1202,
"cds_start": 2712,
"cds_end": null,
"cds_length": 3609,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_015099.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000348066.8"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2781G>C",
"hgvs_p": "p.Lys927Asn",
"transcript": "ENST00000414043.7",
"protein_id": "ENSP00000412886.3",
"transcript_support_level": 1,
"aa_start": 927,
"aa_end": null,
"aa_length": 1241,
"cds_start": 2781,
"cds_end": null,
"cds_length": 3726,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000414043.7"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2709G>C",
"hgvs_p": "p.Lys903Asn",
"transcript": "ENST00000361571.9",
"protein_id": "ENSP00000354828.5",
"transcript_support_level": 1,
"aa_start": 903,
"aa_end": null,
"aa_length": 1201,
"cds_start": 2709,
"cds_end": null,
"cds_length": 3606,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000361571.9"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2718G>C",
"hgvs_p": "p.Lys906Asn",
"transcript": "ENST00000381311.9",
"protein_id": "ENSP00000370712.5",
"transcript_support_level": 1,
"aa_start": 906,
"aa_end": null,
"aa_length": 1197,
"cds_start": 2718,
"cds_end": null,
"cds_length": 3594,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000381311.9"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2781G>C",
"hgvs_p": "p.Lys927Asn",
"transcript": "NM_001171167.2",
"protein_id": "NP_001164638.1",
"transcript_support_level": null,
"aa_start": 927,
"aa_end": null,
"aa_length": 1241,
"cds_start": 2781,
"cds_end": null,
"cds_length": 3726,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001171167.2"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2727G>C",
"hgvs_p": "p.Lys909Asn",
"transcript": "ENST00000572543.5",
"protein_id": "ENSP00000460779.1",
"transcript_support_level": 5,
"aa_start": 909,
"aa_end": null,
"aa_length": 1207,
"cds_start": 2727,
"cds_end": null,
"cds_length": 3624,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000572543.5"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2712G>C",
"hgvs_p": "p.Lys904Asn",
"transcript": "ENST00000943393.1",
"protein_id": "ENSP00000613452.1",
"transcript_support_level": null,
"aa_start": 904,
"aa_end": null,
"aa_length": 1202,
"cds_start": 2712,
"cds_end": null,
"cds_length": 3609,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000943393.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2709G>C",
"hgvs_p": "p.Lys903Asn",
"transcript": "NM_001171168.2",
"protein_id": "NP_001164639.1",
"transcript_support_level": null,
"aa_start": 903,
"aa_end": null,
"aa_length": 1201,
"cds_start": 2709,
"cds_end": null,
"cds_length": 3606,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001171168.2"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2727G>C",
"hgvs_p": "p.Lys909Asn",
"transcript": "ENST00000892492.1",
"protein_id": "ENSP00000562551.1",
"transcript_support_level": null,
"aa_start": 909,
"aa_end": null,
"aa_length": 1200,
"cds_start": 2727,
"cds_end": null,
"cds_length": 3603,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892492.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2727G>C",
"hgvs_p": "p.Lys909Asn",
"transcript": "ENST00000892496.1",
"protein_id": "ENSP00000562555.1",
"transcript_support_level": null,
"aa_start": 909,
"aa_end": null,
"aa_length": 1200,
"cds_start": 2727,
"cds_end": null,
"cds_length": 3603,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892496.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2727G>C",
"hgvs_p": "p.Lys909Asn",
"transcript": "ENST00000892500.1",
"protein_id": "ENSP00000562559.1",
"transcript_support_level": null,
"aa_start": 909,
"aa_end": null,
"aa_length": 1200,
"cds_start": 2727,
"cds_end": null,
"cds_length": 3603,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892500.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2718G>C",
"hgvs_p": "p.Lys906Asn",
"transcript": "NM_001171166.2",
"protein_id": "NP_001164637.1",
"transcript_support_level": null,
"aa_start": 906,
"aa_end": null,
"aa_length": 1197,
"cds_start": 2718,
"cds_end": null,
"cds_length": 3594,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001171166.2"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2712G>C",
"hgvs_p": "p.Lys904Asn",
"transcript": "ENST00000892494.1",
"protein_id": "ENSP00000562553.1",
"transcript_support_level": null,
"aa_start": 904,
"aa_end": null,
"aa_length": 1195,
"cds_start": 2712,
"cds_end": null,
"cds_length": 3588,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892494.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2712G>C",
"hgvs_p": "p.Lys904Asn",
"transcript": "ENST00000892499.1",
"protein_id": "ENSP00000562558.1",
"transcript_support_level": null,
"aa_start": 904,
"aa_end": null,
"aa_length": 1195,
"cds_start": 2712,
"cds_end": null,
"cds_length": 3588,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892499.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2709G>C",
"hgvs_p": "p.Lys903Asn",
"transcript": "ENST00000892493.1",
"protein_id": "ENSP00000562552.1",
"transcript_support_level": null,
"aa_start": 903,
"aa_end": null,
"aa_length": 1194,
"cds_start": 2709,
"cds_end": null,
"cds_length": 3585,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892493.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2640G>C",
"hgvs_p": "p.Lys880Asn",
"transcript": "ENST00000943394.1",
"protein_id": "ENSP00000613453.1",
"transcript_support_level": null,
"aa_start": 880,
"aa_end": null,
"aa_length": 1178,
"cds_start": 2640,
"cds_end": null,
"cds_length": 3537,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000943394.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2649G>C",
"hgvs_p": "p.Lys883Asn",
"transcript": "ENST00000892498.1",
"protein_id": "ENSP00000562557.1",
"transcript_support_level": null,
"aa_start": 883,
"aa_end": null,
"aa_length": 1174,
"cds_start": 2649,
"cds_end": null,
"cds_length": 3525,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892498.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2640G>C",
"hgvs_p": "p.Lys880Asn",
"transcript": "ENST00000935711.1",
"protein_id": "ENSP00000605770.1",
"transcript_support_level": null,
"aa_start": 880,
"aa_end": null,
"aa_length": 1171,
"cds_start": 2640,
"cds_end": null,
"cds_length": 3516,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935711.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2640G>C",
"hgvs_p": "p.Lys880Asn",
"transcript": "ENST00000935712.1",
"protein_id": "ENSP00000605771.1",
"transcript_support_level": null,
"aa_start": 880,
"aa_end": null,
"aa_length": 1171,
"cds_start": 2640,
"cds_end": null,
"cds_length": 3516,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935712.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2634G>C",
"hgvs_p": "p.Lys878Asn",
"transcript": "ENST00000892495.1",
"protein_id": "ENSP00000562554.1",
"transcript_support_level": null,
"aa_start": 878,
"aa_end": null,
"aa_length": 1169,
"cds_start": 2634,
"cds_end": null,
"cds_length": 3510,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892495.1"
},
{
"aa_ref": "K",
"aa_alt": "N",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CAMTA2",
"gene_hgnc_id": 18807,
"hgvs_c": "c.2625G>C",
"hgvs_p": "p.Lys875Asn",
"transcript": "ENST00000892497.1",
"protein_id": "ENSP00000562556.1",
"transcript_support_level": null,
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{
"score": -8,
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"BS2"
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"verdict": "Benign",
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{
"score": -4,
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],
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"effects": [
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],
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}
],
"clinvar_disease": "not specified",
"clinvar_classification": "Uncertain significance",
"clinvar_review_status": "criteria provided, single submitter",
"clinvar_submissions_summary": "US:1",
"phenotype_combined": "not specified",
"pathogenicity_classification_combined": "Uncertain significance",
"custom_annotations": null
}
],
"message": null
}