← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 17-61392041-A-G (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=17&pos=61392041&ref=A&alt=G&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "17",
      "pos": 61392041,
      "ref": "A",
      "alt": "G",
      "effect": "missense_variant",
      "transcript": "NM_017679.5",
      "consequences": [
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 24,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2658A>G",
          "hgvs_p": "p.Ile886Met",
          "transcript": "NM_017679.5",
          "protein_id": "NP_060149.3",
          "transcript_support_level": null,
          "aa_start": 886,
          "aa_end": null,
          "aa_length": 913,
          "cds_start": 2658,
          "cds_end": null,
          "cds_length": 2742,
          "cdna_start": 2727,
          "cdna_end": null,
          "cdna_length": 3517,
          "mane_select": "ENST00000407086.8",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 24,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2658A>G",
          "hgvs_p": "p.Ile886Met",
          "transcript": "ENST00000407086.8",
          "protein_id": "ENSP00000385323.2",
          "transcript_support_level": 1,
          "aa_start": 886,
          "aa_end": null,
          "aa_length": 913,
          "cds_start": 2658,
          "cds_end": null,
          "cds_length": 2742,
          "cdna_start": 2727,
          "cdna_end": null,
          "cdna_length": 3517,
          "mane_select": "NM_017679.5",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2703A>G",
          "hgvs_p": "p.Ile901Met",
          "transcript": "ENST00000390652.9",
          "protein_id": "ENSP00000375067.4",
          "transcript_support_level": 1,
          "aa_start": 901,
          "aa_end": null,
          "aa_length": 928,
          "cds_start": 2703,
          "cds_end": null,
          "cds_length": 2787,
          "cdna_start": 2734,
          "cdna_end": null,
          "cdna_length": 3531,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "n.1304A>G",
          "hgvs_p": null,
          "transcript": "ENST00000592702.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2094,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 26,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.*28A>G",
          "hgvs_p": null,
          "transcript": "ENST00000589222.5",
          "protein_id": "ENSP00000466078.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 928,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 2787,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3673,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 26,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2793A>G",
          "hgvs_p": "p.Ile931Met",
          "transcript": "NM_001353144.2",
          "protein_id": "NP_001340073.1",
          "transcript_support_level": null,
          "aa_start": 931,
          "aa_end": null,
          "aa_length": 958,
          "cds_start": 2793,
          "cds_end": null,
          "cds_length": 2877,
          "cdna_start": 2862,
          "cdna_end": null,
          "cdna_length": 3652,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 26,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2769A>G",
          "hgvs_p": "p.Ile923Met",
          "transcript": "NM_001330413.2",
          "protein_id": "NP_001317342.1",
          "transcript_support_level": null,
          "aa_start": 923,
          "aa_end": null,
          "aa_length": 950,
          "cds_start": 2769,
          "cds_end": null,
          "cds_length": 2853,
          "cdna_start": 2838,
          "cdna_end": null,
          "cdna_length": 3628,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2769A>G",
          "hgvs_p": "p.Ile923Met",
          "transcript": "ENST00000588462.5",
          "protein_id": "ENSP00000468592.1",
          "transcript_support_level": 5,
          "aa_start": 923,
          "aa_end": null,
          "aa_length": 950,
          "cds_start": 2769,
          "cds_end": null,
          "cds_length": 2853,
          "cdna_start": 2769,
          "cdna_end": null,
          "cdna_length": 3559,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2748A>G",
          "hgvs_p": "p.Ile916Met",
          "transcript": "NM_001353145.2",
          "protein_id": "NP_001340074.1",
          "transcript_support_level": null,
          "aa_start": 916,
          "aa_end": null,
          "aa_length": 943,
          "cds_start": 2748,
          "cds_end": null,
          "cds_length": 2832,
          "cdna_start": 2817,
          "cdna_end": null,
          "cdna_length": 3607,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2724A>G",
          "hgvs_p": "p.Ile908Met",
          "transcript": "NM_001330414.2",
          "protein_id": "NP_001317343.1",
          "transcript_support_level": null,
          "aa_start": 908,
          "aa_end": null,
          "aa_length": 935,
          "cds_start": 2724,
          "cds_end": null,
          "cds_length": 2808,
          "cdna_start": 2793,
          "cdna_end": null,
          "cdna_length": 3583,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 24,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2724A>G",
          "hgvs_p": "p.Ile908Met",
          "transcript": "ENST00000408905.7",
          "protein_id": "ENSP00000386173.2",
          "transcript_support_level": 5,
          "aa_start": 908,
          "aa_end": null,
          "aa_length": 935,
          "cds_start": 2724,
          "cds_end": null,
          "cds_length": 2808,
          "cdna_start": 2724,
          "cdna_end": null,
          "cdna_length": 3514,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2703A>G",
          "hgvs_p": "p.Ile901Met",
          "transcript": "NM_001099432.3",
          "protein_id": "NP_001092902.1",
          "transcript_support_level": null,
          "aa_start": 901,
          "aa_end": null,
          "aa_length": 928,
          "cds_start": 2703,
          "cds_end": null,
          "cds_length": 2787,
          "cdna_start": 2772,
          "cdna_end": null,
          "cdna_length": 3562,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 17,
          "exon_rank_end": null,
          "exon_count": 17,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.2016A>G",
          "hgvs_p": "p.Ile672Met",
          "transcript": "ENST00000585744.5",
          "protein_id": "ENSP00000468682.1",
          "transcript_support_level": 5,
          "aa_start": 672,
          "aa_end": null,
          "aa_length": 699,
          "cds_start": 2016,
          "cds_end": null,
          "cds_length": 2100,
          "cdna_start": 2119,
          "cdna_end": null,
          "cdna_length": 2203,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.1971A>G",
          "hgvs_p": "p.Ile657Met",
          "transcript": "ENST00000588874.5",
          "protein_id": "ENSP00000464825.1",
          "transcript_support_level": 2,
          "aa_start": 657,
          "aa_end": null,
          "aa_length": 684,
          "cds_start": 1971,
          "cds_end": null,
          "cds_length": 2055,
          "cdna_start": 2159,
          "cdna_end": null,
          "cdna_length": 2948,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "n.1424A>G",
          "hgvs_p": null,
          "transcript": "ENST00000585812.5",
          "protein_id": null,
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2214,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "n.796A>G",
          "hgvs_p": null,
          "transcript": "ENST00000587294.5",
          "protein_id": null,
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 937,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "n.643A>G",
          "hgvs_p": null,
          "transcript": "ENST00000588569.1",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 875,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 1,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "n.3766A>G",
          "hgvs_p": null,
          "transcript": "ENST00000588720.1",
          "protein_id": null,
          "transcript_support_level": 6,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4556,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 26,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.*28A>G",
          "hgvs_p": null,
          "transcript": "NM_001320470.3",
          "protein_id": "NP_001307399.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 928,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 2787,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3674,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 26,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "BCAS3",
          "gene_hgnc_id": 14347,
          "hgvs_c": "c.*28A>G",
          "hgvs_p": null,
          "transcript": "NM_001353146.2",
          "protein_id": "NP_001340075.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 921,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 2766,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3653,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "TBX2-AS1",
          "gene_hgnc_id": 50355,
          "hgvs_c": "n.28+8175T>C",
          "hgvs_p": null,
          "transcript": "ENST00000585765.1",
          "protein_id": null,
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 470,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "TBX2-AS1",
          "gene_hgnc_id": 50355,
          "hgvs_c": "n.104+8175T>C",
          "hgvs_p": null,
          "transcript": "ENST00000717203.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 793,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "TBX2-AS1",
          "gene_hgnc_id": 50355,
          "hgvs_c": "n.113+8175T>C",
          "hgvs_p": null,
          "transcript": "ENST00000722629.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 513,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "TBX2-AS1",
          "gene_hgnc_id": 50355,
          "hgvs_c": "n.104+8175T>C",
          "hgvs_p": null,
          "transcript": "ENST00000722630.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 753,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "TBX2-AS1",
          "gene_hgnc_id": 50355,
          "hgvs_c": "n.187+7198T>C",
          "hgvs_p": null,
          "transcript": "ENST00000722631.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 583,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "BCAS3",
      "gene_hgnc_id": 14347,
      "dbsnp": "rs777904187",
      "frequency_reference_population": 0.000021689124,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 35,
      "gnomad_exomes_af": 0.0000232616,
      "gnomad_genomes_af": 0.00000657575,
      "gnomad_exomes_ac": 34,
      "gnomad_genomes_ac": 1,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.10170426964759827,
      "computational_prediction_selected": "Benign",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.343,
      "revel_prediction": "Uncertain_significance",
      "alphamissense_score": 0.3147,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.15,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 2.147,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -1,
      "acmg_classification": "Likely_benign",
      "acmg_criteria": "PM1,BP4_Moderate,BS1_Supporting",
      "acmg_by_gene": [
        {
          "score": -1,
          "benign_score": 3,
          "pathogenic_score": 2,
          "criteria": [
            "PM1",
            "BP4_Moderate",
            "BS1_Supporting"
          ],
          "verdict": "Likely_benign",
          "transcript": "NM_017679.5",
          "gene_symbol": "BCAS3",
          "hgnc_id": 14347,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.2658A>G",
          "hgvs_p": "p.Ile886Met"
        },
        {
          "score": -2,
          "benign_score": 2,
          "pathogenic_score": 0,
          "criteria": [
            "BP4_Moderate"
          ],
          "verdict": "Likely_benign",
          "transcript": "ENST00000717203.1",
          "gene_symbol": "TBX2-AS1",
          "hgnc_id": 50355,
          "effects": [
            "intron_variant"
          ],
          "inheritance_mode": "",
          "hgvs_c": "n.104+8175T>C",
          "hgvs_p": null
        }
      ],
      "clinvar_disease": "Inborn genetic diseases",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "US:1",
      "phenotype_combined": "Inborn genetic diseases",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}