← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 18-27952196-C-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=18&pos=27952196&ref=C&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "message": null,
  "variants": [
    {
      "acmg_by_gene": [
        {
          "benign_score": 4,
          "criteria": [
            "PP3_Moderate",
            "BS2"
          ],
          "effects": [
            "missense_variant"
          ],
          "gene_symbol": "CDH2",
          "hgnc_id": 1759,
          "hgvs_c": "c.2678G>A",
          "hgvs_p": "p.Arg893Gln",
          "inheritance_mode": "AD",
          "pathogenic_score": 2,
          "score": -2,
          "transcript": "NM_001792.5",
          "verdict": "Likely_benign"
        },
        {
          "benign_score": 0,
          "criteria": [
            "PM2",
            "PP3_Moderate"
          ],
          "effects": [
            "intron_variant"
          ],
          "gene_symbol": "CDH2-AS1",
          "hgnc_id": 40138,
          "hgvs_c": "n.223-2322C>T",
          "hgvs_p": null,
          "inheritance_mode": "",
          "pathogenic_score": 4,
          "score": 4,
          "transcript": "ENST00000423367.3",
          "verdict": "Uncertain_significance"
        }
      ],
      "acmg_classification": "Likely_benign",
      "acmg_criteria": "PP3_Moderate,BS2",
      "acmg_score": -2,
      "allele_count_reference_population": 11,
      "alphamissense_prediction": null,
      "alphamissense_score": 0.968,
      "alt": "T",
      "apogee2_prediction": null,
      "apogee2_score": null,
      "bayesdelnoaf_prediction": "Pathogenic",
      "bayesdelnoaf_score": 0.33,
      "chr": "18",
      "clinvar_classification": "Uncertain significance",
      "clinvar_disease": "not provided",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "US:1",
      "computational_prediction_selected": "Pathogenic",
      "computational_score_selected": 0.8785395622253418,
      "computational_source_selected": "MetaRNN",
      "consequences": [
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 906,
          "aa_ref": "R",
          "aa_start": 893,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4016,
          "cdna_start": 2786,
          "cds_end": null,
          "cds_length": 2721,
          "cds_start": 2678,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": 16,
          "exon_rank_end": null,
          "feature": "NM_001792.5",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2678G>A",
          "hgvs_p": "p.Arg893Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "ENST00000269141.8",
          "protein_coding": true,
          "protein_id": "NP_001783.2",
          "strand": false,
          "transcript": "NM_001792.5",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 906,
          "aa_ref": "R",
          "aa_start": 893,
          "biotype": "protein_coding",
          "canonical": true,
          "cdna_end": null,
          "cdna_length": 4016,
          "cdna_start": 2786,
          "cds_end": null,
          "cds_length": 2721,
          "cds_start": 2678,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": 16,
          "exon_rank_end": null,
          "feature": "ENST00000269141.8",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2678G>A",
          "hgvs_p": "p.Arg893Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "NM_001792.5",
          "protein_coding": true,
          "protein_id": "ENSP00000269141.3",
          "strand": false,
          "transcript": "ENST00000269141.8",
          "transcript_support_level": 1
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 905,
          "aa_ref": "R",
          "aa_start": 892,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3798,
          "cdna_start": 2764,
          "cds_end": null,
          "cds_length": 2718,
          "cds_start": 2675,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": 16,
          "exon_rank_end": null,
          "feature": "ENST00000876838.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2675G>A",
          "hgvs_p": "p.Arg892Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000546897.1",
          "strand": false,
          "transcript": "ENST00000876838.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 875,
          "aa_ref": "R",
          "aa_start": 862,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3908,
          "cdna_start": 2678,
          "cds_end": null,
          "cds_length": 2628,
          "cds_start": 2585,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": 15,
          "exon_rank_end": null,
          "feature": "NM_001308176.2",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2585G>A",
          "hgvs_p": "p.Arg862Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001295105.1",
          "strand": false,
          "transcript": "NM_001308176.2",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 875,
          "aa_ref": "R",
          "aa_start": 862,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3737,
          "cdna_start": 2622,
          "cds_end": null,
          "cds_length": 2628,
          "cds_start": 2585,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": 15,
          "exon_rank_end": null,
          "feature": "ENST00000399380.7",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2585G>A",
          "hgvs_p": "p.Arg862Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000382312.3",
          "strand": false,
          "transcript": "ENST00000399380.7",
          "transcript_support_level": 2
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 854,
          "aa_ref": "R",
          "aa_start": 841,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3645,
          "cdna_start": 2626,
          "cds_end": null,
          "cds_length": 2565,
          "cds_start": 2522,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": 15,
          "exon_rank_end": null,
          "feature": "ENST00000876839.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2522G>A",
          "hgvs_p": "p.Arg841Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000546898.1",
          "strand": false,
          "transcript": "ENST00000876839.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 852,
          "aa_ref": "R",
          "aa_start": 839,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3831,
          "cdna_start": 2602,
          "cds_end": null,
          "cds_length": 2559,
          "cds_start": 2516,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": 16,
          "exon_rank_end": null,
          "feature": "ENST00000967818.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2516G>A",
          "hgvs_p": "p.Arg839Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000637877.1",
          "strand": false,
          "transcript": "ENST00000967818.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 851,
          "aa_ref": "R",
          "aa_start": 838,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3911,
          "cdna_start": 2687,
          "cds_end": null,
          "cds_length": 2556,
          "cds_start": 2513,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 15,
          "exon_rank": 15,
          "exon_rank_end": null,
          "feature": "ENST00000967816.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2513G>A",
          "hgvs_p": "p.Arg838Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000637875.1",
          "strand": false,
          "transcript": "ENST00000967816.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 821,
          "aa_ref": "R",
          "aa_start": 808,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3143,
          "cdna_start": 2868,
          "cds_end": null,
          "cds_length": 2466,
          "cds_start": 2423,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 17,
          "exon_rank": 17,
          "exon_rank_end": null,
          "feature": "ENST00000430882.6",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2423G>A",
          "hgvs_p": "p.Arg808Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000412120.2",
          "strand": false,
          "transcript": "ENST00000430882.6",
          "transcript_support_level": 4
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 821,
          "aa_ref": "R",
          "aa_start": 808,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3243,
          "cdna_start": 2702,
          "cds_end": null,
          "cds_length": 2466,
          "cds_start": 2423,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": 16,
          "exon_rank_end": null,
          "feature": "ENST00000676445.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2423G>A",
          "hgvs_p": "p.Arg808Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000502206.1",
          "strand": false,
          "transcript": "ENST00000676445.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 800,
          "aa_ref": "R",
          "aa_start": 787,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3492,
          "cdna_start": 2473,
          "cds_end": null,
          "cds_length": 2403,
          "cds_start": 2360,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 14,
          "exon_rank": 14,
          "exon_rank_end": null,
          "feature": "ENST00000967819.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2360G>A",
          "hgvs_p": "p.Arg787Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000637878.1",
          "strand": false,
          "transcript": "ENST00000967819.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 463,
          "aa_ref": "R",
          "aa_start": 450,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 2791,
          "cdna_start": 1558,
          "cds_end": null,
          "cds_length": 1392,
          "cds_start": 1349,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 9,
          "exon_rank": 9,
          "exon_rank_end": null,
          "feature": "ENST00000967815.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.1349G>A",
          "hgvs_p": "p.Arg450Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000637873.1",
          "strand": false,
          "transcript": "ENST00000967815.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "Q",
          "aa_end": null,
          "aa_length": 821,
          "aa_ref": "R",
          "aa_start": 808,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3997,
          "cdna_start": 2767,
          "cds_end": null,
          "cds_length": 2466,
          "cds_start": 2423,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 16,
          "exon_rank": 16,
          "exon_rank_end": null,
          "feature": "XM_011525788.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2423G>A",
          "hgvs_p": "p.Arg808Gln",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "XP_011524090.1",
          "strand": false,
          "transcript": "XM_011525788.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 393,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 1397,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": 1182,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 7,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000675173.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.1149+11161G>A",
          "hgvs_p": null,
          "intron_rank": 6,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000502696.1",
          "strand": false,
          "transcript": "ENST00000675173.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": 848,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 2868,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": 2547,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 16,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "XM_017025514.3",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "c.2514+11161G>A",
          "hgvs_p": null,
          "intron_rank": 15,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "XP_016881003.1",
          "strand": false,
          "transcript": "XM_017025514.3",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "retained_intron",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3627,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_count": 2,
          "exon_rank": 2,
          "exon_rank_end": null,
          "feature": "ENST00000674998.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "n.2643G>A",
          "hgvs_p": null,
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": null,
          "strand": false,
          "transcript": "ENST00000674998.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "nonsense_mediated_decay",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3860,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_count": 18,
          "exon_rank": 18,
          "exon_rank_end": null,
          "feature": "ENST00000675708.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "n.*993G>A",
          "hgvs_p": null,
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": "ENSP00000501654.1",
          "strand": false,
          "transcript": "ENST00000675708.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "nonsense_mediated_decay",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3860,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_count": 18,
          "exon_rank": 18,
          "exon_rank_end": null,
          "feature": "ENST00000675708.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "n.*993G>A",
          "hgvs_p": null,
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": "ENSP00000501654.1",
          "strand": false,
          "transcript": "ENST00000675708.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "pseudogene",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 672,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 4,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000423367.3",
          "gene_hgnc_id": 40138,
          "gene_symbol": "CDH2-AS1",
          "hgvs_c": "n.223-2322C>T",
          "hgvs_p": null,
          "intron_rank": 1,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": null,
          "strand": true,
          "transcript": "ENST00000423367.3",
          "transcript_support_level": 3
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "nonsense_mediated_decay",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 899,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 6,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000675688.1",
          "gene_hgnc_id": 1759,
          "gene_symbol": "CDH2",
          "hgvs_c": "n.465+11161G>A",
          "hgvs_p": null,
          "intron_rank": 3,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": "ENSP00000502061.1",
          "strand": false,
          "transcript": "ENST00000675688.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "pseudogene",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 833,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 5,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000785469.1",
          "gene_hgnc_id": 40138,
          "gene_symbol": "CDH2-AS1",
          "hgvs_c": "n.291-2322C>T",
          "hgvs_p": null,
          "intron_rank": 1,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": null,
          "strand": true,
          "transcript": "ENST00000785469.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "pseudogene",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 737,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 5,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000785470.1",
          "gene_hgnc_id": 40138,
          "gene_symbol": "CDH2-AS1",
          "hgvs_c": "n.292-2322C>T",
          "hgvs_p": null,
          "intron_rank": 2,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": null,
          "strand": true,
          "transcript": "ENST00000785470.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "pseudogene",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 287,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 2,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000785471.1",
          "gene_hgnc_id": 40138,
          "gene_symbol": "CDH2-AS1",
          "hgvs_c": "n.148-2322C>T",
          "hgvs_p": null,
          "intron_rank": 1,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": null,
          "strand": true,
          "transcript": "ENST00000785471.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": null,
          "aa_end": null,
          "aa_length": null,
          "aa_ref": null,
          "aa_start": null,
          "biotype": "pseudogene",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 601,
          "cdna_start": null,
          "cds_end": null,
          "cds_length": null,
          "cds_start": null,
          "consequences": [
            "intron_variant"
          ],
          "exon_count": 4,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NR_199051.1",
          "gene_hgnc_id": 40138,
          "gene_symbol": "CDH2-AS1",
          "hgvs_c": "n.156-2322C>T",
          "hgvs_p": null,
          "intron_rank": 1,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": false,
          "protein_id": null,
          "strand": true,
          "transcript": "NR_199051.1",
          "transcript_support_level": null
        }
      ],
      "custom_annotations": null,
      "dbscsnv_ada_prediction": null,
      "dbscsnv_ada_score": null,
      "dbsnp": "rs201294768",
      "effect": "missense_variant",
      "frequency_reference_population": 0.0000068168606,
      "gene_hgnc_id": 1759,
      "gene_symbol": "CDH2",
      "gnomad_exomes_ac": 8,
      "gnomad_exomes_af": 0.00000547393,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_ac": 3,
      "gnomad_genomes_af": 0.0000197145,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_heteroplasmic": null,
      "gnomad_mito_homoplasmic": null,
      "hom_count_reference_population": 0,
      "mitotip_prediction": null,
      "mitotip_score": null,
      "pathogenicity_classification_combined": "Uncertain significance",
      "phenotype_combined": "not provided",
      "phylop100way_prediction": "Pathogenic",
      "phylop100way_score": 7.905,
      "pos": 27952196,
      "ref": "C",
      "revel_prediction": "Pathogenic",
      "revel_score": 0.771,
      "splice_prediction_selected": "Benign",
      "splice_score_selected": 0,
      "splice_source_selected": "max_spliceai",
      "spliceai_max_prediction": "Benign",
      "spliceai_max_score": 0,
      "transcript": "NM_001792.5"
    }
  ]
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.