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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 18-77003793-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=18&pos=77003793&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "18",
"pos": 77003793,
"ref": "T",
"alt": "C",
"effect": "intron_variant",
"transcript": "ENST00000355994.7",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.576+13039A>G",
"hgvs_p": null,
"transcript": "NM_001025101.2",
"protein_id": "NP_001020272.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 304,
"cds_start": -4,
"cds_end": null,
"cds_length": 915,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2738,
"mane_select": "ENST00000355994.7",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.576+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000355994.7",
"protein_id": "ENSP00000348273.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 304,
"cds_start": -4,
"cds_end": null,
"cds_length": 915,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2738,
"mane_select": "NM_001025101.2",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.255+6056A>G",
"hgvs_p": null,
"transcript": "ENST00000382582.7",
"protein_id": "ENSP00000372025.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 197,
"cds_start": -4,
"cds_end": null,
"cds_length": 594,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2281,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.255+6056A>G",
"hgvs_p": null,
"transcript": "ENST00000359645.7",
"protein_id": "ENSP00000352667.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 186,
"cds_start": -4,
"cds_end": null,
"cds_length": 561,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1255,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000397866.8",
"protein_id": "ENSP00000380964.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 171,
"cds_start": -4,
"cds_end": null,
"cds_length": 516,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2145,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000397865.9",
"protein_id": "ENSP00000380963.5",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 160,
"cds_start": -4,
"cds_end": null,
"cds_length": 483,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2127,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 1,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENSG00000279811",
"gene_hgnc_id": null,
"hgvs_c": "n.3054A>G",
"hgvs_p": null,
"transcript": "ENST00000624814.1",
"protein_id": null,
"transcript_support_level": 6,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3998,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.576+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000580402.5",
"protein_id": "ENSP00000462223.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 304,
"cds_start": -4,
"cds_end": null,
"cds_length": 915,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 915,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.576+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000579129.5",
"protein_id": "ENSP00000463780.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 253,
"cds_start": -4,
"cds_end": null,
"cds_length": 762,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1052,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000397869.7",
"protein_id": "ENSP00000380967.3",
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": 236,
"cds_start": -4,
"cds_end": null,
"cds_length": 711,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 884,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.255+6056A>G",
"hgvs_p": null,
"transcript": "NM_001025081.2",
"protein_id": "NP_001020252.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 197,
"cds_start": -4,
"cds_end": null,
"cds_length": 594,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2235,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.255+6056A>G",
"hgvs_p": null,
"transcript": "NM_002385.3",
"protein_id": "NP_002376.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 186,
"cds_start": -4,
"cds_end": null,
"cds_length": 561,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2202,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000397875.7",
"protein_id": "ENSP00000380973.3",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 181,
"cds_start": -4,
"cds_end": null,
"cds_length": 546,
"cdna_start": null,
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"cdna_length": 2168,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "NM_001025090.2",
"protein_id": "NP_001020261.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 171,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 5,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.255+6056A>G",
"hgvs_p": null,
"transcript": "ENST00000578873.5",
"protein_id": "ENSP00000463137.1",
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": 170,
"cds_start": -4,
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"cds_length": 514,
"cdna_start": null,
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"cdna_length": 561,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "NM_001025092.2",
"protein_id": "NP_001020263.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 160,
"cds_start": -4,
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"cdna_start": null,
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 7,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000578193.5",
"protein_id": "ENSP00000463403.1",
"transcript_support_level": 5,
"aa_start": null,
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"cds_start": -4,
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"cds_length": 474,
"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.111+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000526111.5",
"protein_id": "ENSP00000435641.1",
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": 149,
"cds_start": -4,
"cds_end": null,
"cds_length": 450,
"cdna_start": null,
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"cdna_length": 581,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000527041.1",
"protein_id": "ENSP00000435243.1",
"transcript_support_level": 5,
"aa_start": null,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 5,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.9+6056A>G",
"hgvs_p": null,
"transcript": "ENST00000447114.5",
"protein_id": "ENSP00000405882.1",
"transcript_support_level": 4,
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"cds_start": -4,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000498683.2",
"protein_id": "ENSP00000437063.1",
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"aa_start": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.177+13039A>G",
"hgvs_p": null,
"transcript": "ENST00000354542.4",
"protein_id": "ENSP00000346545.4",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": 73,
"cds_start": -4,
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"cds_length": 222,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 575,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MBP",
"gene_hgnc_id": 6925,
"hgvs_c": "c.95+13121A>G",
"hgvs_p": null,
"transcript": "ENST00000528160.1",
"protein_id": "ENSP00000436830.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 68,
"cds_start": -4,
"cds_end": null,
"cds_length": 207,
"cdna_start": null,
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"cdna_length": 584,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"aa_alt": null,
"canonical": false,
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}