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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 19-12763340-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=19&pos=12763340&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "19",
"pos": 12763340,
"ref": "C",
"alt": "T",
"effect": "missense_variant",
"transcript": "NM_001400041.1",
"consequences": [
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 23,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2102G>A",
"hgvs_p": "p.Arg701His",
"transcript": "NM_013312.3",
"protein_id": "NP_037444.2",
"transcript_support_level": null,
"aa_start": 701,
"aa_end": null,
"aa_length": 719,
"cds_start": 2102,
"cds_end": null,
"cds_length": 2160,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000397668.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_013312.3"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 23,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2102G>A",
"hgvs_p": "p.Arg701His",
"transcript": "ENST00000397668.8",
"protein_id": "ENSP00000380785.2",
"transcript_support_level": 1,
"aa_start": 701,
"aa_end": null,
"aa_length": 719,
"cds_start": 2102,
"cds_end": null,
"cds_length": 2160,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_013312.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000397668.8"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2096G>A",
"hgvs_p": "p.Arg699His",
"transcript": "ENST00000264827.9",
"protein_id": "ENSP00000264827.4",
"transcript_support_level": 1,
"aa_start": 699,
"aa_end": null,
"aa_length": 717,
"cds_start": 2096,
"cds_end": null,
"cds_length": 2154,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000264827.9"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2390G>A",
"hgvs_p": "p.Arg797His",
"transcript": "ENST00000894580.1",
"protein_id": "ENSP00000564639.1",
"transcript_support_level": null,
"aa_start": 797,
"aa_end": null,
"aa_length": 815,
"cds_start": 2390,
"cds_end": null,
"cds_length": 2448,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894580.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2282G>A",
"hgvs_p": "p.Arg761His",
"transcript": "ENST00000894575.1",
"protein_id": "ENSP00000564634.1",
"transcript_support_level": null,
"aa_start": 761,
"aa_end": null,
"aa_length": 779,
"cds_start": 2282,
"cds_end": null,
"cds_length": 2340,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894575.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2279G>A",
"hgvs_p": "p.Arg760His",
"transcript": "ENST00000894576.1",
"protein_id": "ENSP00000564635.1",
"transcript_support_level": null,
"aa_start": 760,
"aa_end": null,
"aa_length": 778,
"cds_start": 2279,
"cds_end": null,
"cds_length": 2337,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894576.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2204G>A",
"hgvs_p": "p.Arg735His",
"transcript": "NM_001400041.1",
"protein_id": "NP_001386970.1",
"transcript_support_level": null,
"aa_start": 735,
"aa_end": null,
"aa_length": 753,
"cds_start": 2204,
"cds_end": null,
"cds_length": 2262,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001400041.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2114G>A",
"hgvs_p": "p.Arg705His",
"transcript": "ENST00000914424.1",
"protein_id": "ENSP00000584483.1",
"transcript_support_level": null,
"aa_start": 705,
"aa_end": null,
"aa_length": 723,
"cds_start": 2114,
"cds_end": null,
"cds_length": 2172,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000914424.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2096G>A",
"hgvs_p": "p.Arg699His",
"transcript": "NM_001100176.2",
"protein_id": "NP_001093646.1",
"transcript_support_level": null,
"aa_start": 699,
"aa_end": null,
"aa_length": 717,
"cds_start": 2096,
"cds_end": null,
"cds_length": 2154,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001100176.2"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2093G>A",
"hgvs_p": "p.Arg698His",
"transcript": "ENST00000894574.1",
"protein_id": "ENSP00000564633.1",
"transcript_support_level": null,
"aa_start": 698,
"aa_end": null,
"aa_length": 716,
"cds_start": 2093,
"cds_end": null,
"cds_length": 2151,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894574.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2090G>A",
"hgvs_p": "p.Arg697His",
"transcript": "ENST00000894579.1",
"protein_id": "ENSP00000564638.1",
"transcript_support_level": null,
"aa_start": 697,
"aa_end": null,
"aa_length": 715,
"cds_start": 2090,
"cds_end": null,
"cds_length": 2148,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894579.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2090G>A",
"hgvs_p": "p.Arg697His",
"transcript": "ENST00000961673.1",
"protein_id": "ENSP00000631732.1",
"transcript_support_level": null,
"aa_start": 697,
"aa_end": null,
"aa_length": 715,
"cds_start": 2090,
"cds_end": null,
"cds_length": 2148,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000961673.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2087G>A",
"hgvs_p": "p.Arg696His",
"transcript": "ENST00000961672.1",
"protein_id": "ENSP00000631731.1",
"transcript_support_level": null,
"aa_start": 696,
"aa_end": null,
"aa_length": 714,
"cds_start": 2087,
"cds_end": null,
"cds_length": 2145,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000961672.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2081G>A",
"hgvs_p": "p.Arg694His",
"transcript": "ENST00000894578.1",
"protein_id": "ENSP00000564637.1",
"transcript_support_level": null,
"aa_start": 694,
"aa_end": null,
"aa_length": 712,
"cds_start": 2081,
"cds_end": null,
"cds_length": 2139,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894578.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2078G>A",
"hgvs_p": "p.Arg693His",
"transcript": "ENST00000914426.1",
"protein_id": "ENSP00000584485.1",
"transcript_support_level": null,
"aa_start": 693,
"aa_end": null,
"aa_length": 711,
"cds_start": 2078,
"cds_end": null,
"cds_length": 2136,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000914426.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2078G>A",
"hgvs_p": "p.Arg693His",
"transcript": "ENST00000961674.1",
"protein_id": "ENSP00000631733.1",
"transcript_support_level": null,
"aa_start": 693,
"aa_end": null,
"aa_length": 711,
"cds_start": 2078,
"cds_end": null,
"cds_length": 2136,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000961674.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2036G>A",
"hgvs_p": "p.Arg679His",
"transcript": "ENST00000961675.1",
"protein_id": "ENSP00000631734.1",
"transcript_support_level": null,
"aa_start": 679,
"aa_end": null,
"aa_length": 697,
"cds_start": 2036,
"cds_end": null,
"cds_length": 2094,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000961675.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2027G>A",
"hgvs_p": "p.Arg676His",
"transcript": "ENST00000894581.1",
"protein_id": "ENSP00000564640.1",
"transcript_support_level": null,
"aa_start": 676,
"aa_end": null,
"aa_length": 694,
"cds_start": 2027,
"cds_end": null,
"cds_length": 2085,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894581.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.2015G>A",
"hgvs_p": "p.Arg672His",
"transcript": "ENST00000914425.1",
"protein_id": "ENSP00000584484.1",
"transcript_support_level": null,
"aa_start": 672,
"aa_end": null,
"aa_length": 690,
"cds_start": 2015,
"cds_end": null,
"cds_length": 2073,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000914425.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.1985G>A",
"hgvs_p": "p.Arg662His",
"transcript": "ENST00000894577.1",
"protein_id": "ENSP00000564636.1",
"transcript_support_level": null,
"aa_start": 662,
"aa_end": null,
"aa_length": 680,
"cds_start": 1985,
"cds_end": null,
"cds_length": 2043,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000894577.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.1877G>A",
"hgvs_p": "p.Arg626His",
"transcript": "NM_001400043.1",
"protein_id": "NP_001386972.1",
"transcript_support_level": null,
"aa_start": 626,
"aa_end": null,
"aa_length": 644,
"cds_start": 1877,
"cds_end": null,
"cds_length": 1935,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001400043.1"
},
{
"aa_ref": "R",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "c.1877G>A",
"hgvs_p": "p.Arg626His",
"transcript": "NM_001400044.1",
"protein_id": "NP_001386973.1",
"transcript_support_level": null,
"aa_start": 626,
"aa_end": null,
"aa_length": 644,
"cds_start": 1877,
"cds_end": null,
"cds_length": 1935,
"cdna_start": null,
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"biotype": "protein_coding",
"feature": "NM_001400044.1"
},
{
"aa_ref": "R",
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": 22,
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"exon_count": 22,
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"gene_symbol": "HOOK2",
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"biotype": "protein_coding",
"feature": "NM_001400045.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
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"gene_symbol": "HOOK2",
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"hgvs_c": "c.1877G>A",
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"protein_id": "NP_001386975.1",
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"biotype": "protein_coding",
"feature": "NM_001400046.1"
},
{
"aa_ref": "R",
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
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"gene_symbol": "HOOK2",
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"hgvs_c": "c.1877G>A",
"hgvs_p": "p.Arg626His",
"transcript": "NM_001400047.1",
"protein_id": "NP_001386976.1",
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "NM_001400047.1"
},
{
"aa_ref": "R",
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
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"exon_count": 22,
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"gene_symbol": "HOOK2",
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"transcript": "NM_001400048.1",
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"biotype": "protein_coding",
"feature": "NM_001400048.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
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"exon_count": 23,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
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"hgvs_c": "n.*1623G>A",
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"transcript": "ENST00000678590.1",
"protein_id": "ENSP00000504514.1",
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"biotype": "nonsense_mediated_decay",
"feature": "ENST00000678590.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 23,
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"exon_count": 23,
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"gene_symbol": "HOOK2",
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"transcript": "ENST00000678590.1",
"protein_id": "ENSP00000504514.1",
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"biotype": "nonsense_mediated_decay",
"feature": "ENST00000678590.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"downstream_gene_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"hgvs_c": "n.*23G>A",
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"transcript": "ENST00000589915.1",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000589915.1"
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],
"gene_symbol": "HOOK2",
"gene_hgnc_id": 19885,
"dbsnp": "rs769580225",
"frequency_reference_population": 0.00008611471,
"hom_count_reference_population": 0,
"allele_count_reference_population": 139,
"gnomad_exomes_af": 0.0000868787,
"gnomad_genomes_af": 0.0000787825,
"gnomad_exomes_ac": 127,
"gnomad_genomes_ac": 12,
"gnomad_exomes_homalt": 0,
"gnomad_genomes_homalt": 0,
"gnomad_mito_homoplasmic": null,
"gnomad_mito_heteroplasmic": null,
"computational_score_selected": 0.3365446925163269,
"computational_prediction_selected": "Benign",
"computational_source_selected": "MetaRNN",
"splice_score_selected": 0,
"splice_prediction_selected": "Benign",
"splice_source_selected": "max_spliceai",
"revel_score": 0.301,
"revel_prediction": "Uncertain_significance",
"alphamissense_score": 0.1877,
"alphamissense_prediction": null,
"bayesdelnoaf_score": -0.33,
"bayesdelnoaf_prediction": "Benign",
"phylop100way_score": 3.779,
"phylop100way_prediction": "Uncertain_significance",
"spliceai_max_score": 0,
"spliceai_max_prediction": "Benign",
"dbscsnv_ada_score": null,
"dbscsnv_ada_prediction": null,
"apogee2_score": null,
"apogee2_prediction": null,
"mitotip_score": null,
"mitotip_prediction": null,
"acmg_score": -1,
"acmg_classification": "Likely_benign",
"acmg_criteria": "BP4",
"acmg_by_gene": [
{
"score": -1,
"benign_score": 1,
"pathogenic_score": 0,
"criteria": [
"BP4"
],
"verdict": "Likely_benign",
"transcript": "NM_001400041.1",
"gene_symbol": "HOOK2",
"hgnc_id": 19885,
"effects": [
"missense_variant"
],
"inheritance_mode": "AR",
"hgvs_c": "c.2204G>A",
"hgvs_p": "p.Arg735His"
}
],
"clinvar_disease": "not specified",
"clinvar_classification": "Uncertain significance",
"clinvar_review_status": "criteria provided, single submitter",
"clinvar_submissions_summary": "US:1",
"phenotype_combined": "not specified",
"pathogenicity_classification_combined": "Uncertain significance",
"custom_annotations": null
}
],
"message": null
}