← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 19-39177693-G-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=19&pos=39177693&ref=G&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "19",
      "pos": 39177693,
      "ref": "G",
      "alt": "C",
      "effect": "missense_variant",
      "transcript": "ENST00000360442.8",
      "consequences": [
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "NM_005884.5",
          "protein_id": "NP_005875.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1733,
          "cdna_end": null,
          "cdna_length": 2830,
          "mane_select": "ENST00000360442.8",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "ENST00000360442.8",
          "protein_id": "ENSP00000353625.3",
          "transcript_support_level": 5,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1733,
          "cdna_end": null,
          "cdna_length": 2830,
          "mane_select": "NM_005884.5",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "ENST00000358301.7",
          "protein_id": "ENSP00000351049.2",
          "transcript_support_level": 1,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1644,
          "cdna_end": null,
          "cdna_length": 2739,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "ENST00000593690.5",
          "protein_id": "ENSP00000469413.1",
          "transcript_support_level": 1,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1931,
          "cdna_end": null,
          "cdna_length": 3025,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1234G>C",
          "hgvs_p": "p.Gly412Arg",
          "transcript": "ENST00000321944.8",
          "protein_id": "ENSP00000326864.4",
          "transcript_support_level": 1,
          "aa_start": 412,
          "aa_end": null,
          "aa_length": 501,
          "cds_start": 1234,
          "cds_end": null,
          "cds_length": 1506,
          "cdna_start": 1461,
          "cdna_end": null,
          "cdna_length": 2555,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "ENST00000599386.5",
          "protein_id": "ENSP00000471157.1",
          "transcript_support_level": 1,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1226,
          "cdna_end": null,
          "cdna_length": 5735,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "ENST00000599470.5",
          "protein_id": "ENSP00000470284.1",
          "transcript_support_level": 1,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1205,
          "cdna_end": null,
          "cdna_length": 1715,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "NM_001014831.3",
          "protein_id": "NP_001014831.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1959,
          "cdna_end": null,
          "cdna_length": 6468,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "NM_001014832.2",
          "protein_id": "NP_001014832.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1660,
          "cdna_end": null,
          "cdna_length": 6169,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "NM_001394501.1",
          "protein_id": "NP_001381430.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1679,
          "cdna_end": null,
          "cdna_length": 2776,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "NM_001014834.3",
          "protein_id": "NP_001014834.1",
          "transcript_support_level": null,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1201,
          "cdna_end": null,
          "cdna_length": 5710,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "NM_001014835.2",
          "protein_id": "NP_001014835.1",
          "transcript_support_level": null,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1274,
          "cdna_end": null,
          "cdna_length": 5783,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.175G>C",
          "hgvs_p": "p.Gly59Arg",
          "transcript": "ENST00000597715.1",
          "protein_id": "ENSP00000472061.1",
          "transcript_support_level": 5,
          "aa_start": 59,
          "aa_end": null,
          "aa_length": 148,
          "cds_start": 175,
          "cds_end": null,
          "cds_length": 447,
          "cdna_start": 176,
          "cdna_end": null,
          "cdna_length": 633,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "XM_011526316.2",
          "protein_id": "XP_011524618.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1743,
          "cdna_end": null,
          "cdna_length": 6252,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "XM_011526317.3",
          "protein_id": "XP_011524619.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1801,
          "cdna_end": null,
          "cdna_length": 6310,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "XM_047438034.1",
          "protein_id": "XP_047293990.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1811,
          "cdna_end": null,
          "cdna_length": 6320,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "XM_047438035.1",
          "protein_id": "XP_047293991.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1827,
          "cdna_end": null,
          "cdna_length": 6336,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "XM_047438036.1",
          "protein_id": "XP_047293992.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1689,
          "cdna_end": null,
          "cdna_length": 6198,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "XM_047438037.1",
          "protein_id": "XP_047293993.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1901,
          "cdna_end": null,
          "cdna_length": 6410,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 10,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg",
          "transcript": "XM_047438038.1",
          "protein_id": "XP_047293994.1",
          "transcript_support_level": null,
          "aa_start": 502,
          "aa_end": null,
          "aa_length": 591,
          "cds_start": 1504,
          "cds_end": null,
          "cds_length": 1776,
          "cdna_start": 1773,
          "cdna_end": null,
          "cdna_length": 6282,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "XM_011526320.2",
          "protein_id": "XP_011524622.1",
          "transcript_support_level": null,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1284,
          "cdna_end": null,
          "cdna_length": 5793,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "XM_024451314.2",
          "protein_id": "XP_024307082.1",
          "transcript_support_level": null,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1352,
          "cdna_end": null,
          "cdna_length": 5861,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "XM_047438040.1",
          "protein_id": "XP_047293996.1",
          "transcript_support_level": null,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1342,
          "cdna_end": null,
          "cdna_length": 5851,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "G",
          "aa_alt": "R",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "c.1045G>C",
          "hgvs_p": "p.Gly349Arg",
          "transcript": "XM_047438041.1",
          "protein_id": "XP_047293997.1",
          "transcript_support_level": null,
          "aa_start": 349,
          "aa_end": null,
          "aa_length": 438,
          "cds_start": 1045,
          "cds_end": null,
          "cds_length": 1317,
          "cdna_start": 1367,
          "cdna_end": null,
          "cdna_length": 5876,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PAK4",
          "gene_hgnc_id": 16059,
          "hgvs_c": "n.246G>C",
          "hgvs_p": null,
          "transcript": "ENST00000600350.1",
          "protein_id": null,
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 549,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "PAK4",
      "gene_hgnc_id": 16059,
      "dbsnp": "rs193920877",
      "frequency_reference_population": null,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 0,
      "gnomad_exomes_af": null,
      "gnomad_genomes_af": null,
      "gnomad_exomes_ac": null,
      "gnomad_genomes_ac": null,
      "gnomad_exomes_homalt": null,
      "gnomad_genomes_homalt": null,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.9931026697158813,
      "computational_prediction_selected": "Pathogenic",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.819,
      "revel_prediction": "Pathogenic",
      "alphamissense_score": 0.9997,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": 0.35,
      "bayesdelnoaf_prediction": "Pathogenic",
      "phylop100way_score": 9.923,
      "phylop100way_prediction": "Pathogenic",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": 6,
      "acmg_classification": "Likely_pathogenic",
      "acmg_criteria": "PM2,PP3_Strong",
      "acmg_by_gene": [
        {
          "score": 6,
          "benign_score": 0,
          "pathogenic_score": 6,
          "criteria": [
            "PM2",
            "PP3_Strong"
          ],
          "verdict": "Likely_pathogenic",
          "transcript": "ENST00000360442.8",
          "gene_symbol": "PAK4",
          "hgnc_id": 16059,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AD",
          "hgvs_c": "c.1504G>C",
          "hgvs_p": "p.Gly502Arg"
        }
      ],
      "clinvar_disease": "Prostate cancer",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "no assertion criteria provided",
      "clinvar_submissions_summary": "null",
      "phenotype_combined": "Prostate cancer",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}