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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 19-4719326-T-TTAAA (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=19&pos=4719326&ref=T&alt=TTAAA&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "19",
"pos": 4719326,
"ref": "T",
"alt": "TTAAA",
"effect": "intron_variant",
"transcript": "ENST00000262960.14",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_139159.5",
"protein_id": "NP_631898.3",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4273,
"mane_select": "ENST00000262960.14",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+524_56+525insTTTA",
"hgvs_p": null,
"transcript": "ENST00000262960.14",
"protein_id": "ENSP00000262960.8",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4273,
"mane_select": "NM_139159.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384611.1",
"protein_id": "NP_001371540.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4139,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384612.1",
"protein_id": "NP_001371541.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4383,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384613.1",
"protein_id": "NP_001371542.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4148,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384614.1",
"protein_id": "NP_001371543.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4081,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384615.1",
"protein_id": "NP_001371544.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4220,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+524_56+525insTTTA",
"hgvs_p": null,
"transcript": "ENST00000600621.6",
"protein_id": "ENSP00000472549.2",
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4229,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+524_56+525insTTTA",
"hgvs_p": null,
"transcript": "ENST00000601130.6",
"protein_id": "ENSP00000471629.2",
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": 892,
"cds_start": -4,
"cds_end": null,
"cds_length": 2679,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4387,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384617.1",
"protein_id": "NP_001371546.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 890,
"cds_start": -4,
"cds_end": null,
"cds_length": 2673,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4267,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384618.1",
"protein_id": "NP_001371547.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 883,
"cds_start": -4,
"cds_end": null,
"cds_length": 2652,
"cdna_start": null,
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"cdna_length": 4246,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384619.1",
"protein_id": "NP_001371548.1",
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"aa_start": null,
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"cdna_start": null,
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"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384620.1",
"protein_id": "NP_001371549.1",
"transcript_support_level": null,
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"cds_start": -4,
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"cdna_start": null,
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"feature": null
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 23,
"intron_rank": 4,
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"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384621.1",
"protein_id": "NP_001371550.1",
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 22,
"intron_rank": 3,
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"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384622.1",
"protein_id": "NP_001371551.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 865,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.-178+521_-178+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384623.1",
"protein_id": "NP_001371552.1",
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"feature": null
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"splice_region_variant",
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.-153-6_-153-3dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384624.1",
"protein_id": "NP_001371553.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 863,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.-94+521_-94+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384625.1",
"protein_id": "NP_001371554.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cdna_start": null,
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.-181-474_-181-471dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384626.1",
"protein_id": "NP_001371555.1",
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 4,
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"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.-230+521_-230+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384627.1",
"protein_id": "NP_001371556.1",
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 3,
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"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.-230+524_-230+525insTTTA",
"hgvs_p": null,
"transcript": "ENST00000598800.5",
"protein_id": "ENSP00000469603.1",
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"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384628.1",
"protein_id": "NP_001371557.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 859,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "DPP9",
"gene_hgnc_id": 18648,
"hgvs_c": "c.56+521_56+524dupTTTA",
"hgvs_p": null,
"transcript": "NM_001384629.1",
"protein_id": "NP_001371558.1",
"transcript_support_level": null,
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