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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 19-51968610-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=19&pos=51968610&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "19",
"pos": 51968610,
"ref": "A",
"alt": "G",
"effect": "missense_variant",
"transcript": "ENST00000243644.9",
"consequences": [
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "NM_021632.4",
"protein_id": "NP_067645.3",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 532,
"cds_start": 206,
"cds_end": null,
"cds_length": 1599,
"cdna_start": 448,
"cdna_end": null,
"cdna_length": 2355,
"mane_select": "ENST00000243644.9",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "ENST00000243644.9",
"protein_id": "ENSP00000243644.3",
"transcript_support_level": 1,
"aa_start": 69,
"aa_end": null,
"aa_length": 532,
"cds_start": 206,
"cds_end": null,
"cds_length": 1599,
"cdna_start": 448,
"cdna_end": null,
"cdna_length": 2355,
"mane_select": "NM_021632.4",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.125-7781A>G",
"hgvs_p": null,
"transcript": "ENST00000595010.5",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 755,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.98T>C",
"hgvs_p": "p.Ile33Thr",
"transcript": "ENST00000601430.5",
"protein_id": "ENSP00000470930.1",
"transcript_support_level": 4,
"aa_start": 33,
"aa_end": null,
"aa_length": 162,
"cds_start": 98,
"cds_end": null,
"cds_length": 489,
"cdna_start": 478,
"cdna_end": null,
"cdna_length": 869,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_017027094.2",
"protein_id": "XP_016882583.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 574,
"cds_start": 206,
"cds_end": null,
"cds_length": 1725,
"cdna_start": 448,
"cdna_end": null,
"cdna_length": 2481,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_017027096.2",
"protein_id": "XP_016882585.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 574,
"cds_start": 206,
"cds_end": null,
"cds_length": 1725,
"cdna_start": 483,
"cdna_end": null,
"cdna_length": 2516,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_047439182.1",
"protein_id": "XP_047295138.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 574,
"cds_start": 206,
"cds_end": null,
"cds_length": 1725,
"cdna_start": 696,
"cdna_end": null,
"cdna_length": 2729,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_047439183.1",
"protein_id": "XP_047295139.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 574,
"cds_start": 206,
"cds_end": null,
"cds_length": 1725,
"cdna_start": 739,
"cdna_end": null,
"cdna_length": 2772,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_017027098.2",
"protein_id": "XP_016882587.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 532,
"cds_start": 206,
"cds_end": null,
"cds_length": 1599,
"cdna_start": 696,
"cdna_end": null,
"cdna_length": 2603,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_017027099.2",
"protein_id": "XP_016882588.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 532,
"cds_start": 206,
"cds_end": null,
"cds_length": 1599,
"cdna_start": 739,
"cdna_end": null,
"cdna_length": 2646,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_017027100.1",
"protein_id": "XP_016882589.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 532,
"cds_start": 206,
"cds_end": null,
"cds_length": 1599,
"cdna_start": 593,
"cdna_end": null,
"cdna_length": 2500,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_047439184.1",
"protein_id": "XP_047295140.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 532,
"cds_start": 206,
"cds_end": null,
"cds_length": 1599,
"cdna_start": 1036,
"cdna_end": null,
"cdna_length": 2943,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "T",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "c.206T>C",
"hgvs_p": "p.Ile69Thr",
"transcript": "XM_047439185.1",
"protein_id": "XP_047295141.1",
"transcript_support_level": null,
"aa_start": 69,
"aa_end": null,
"aa_length": 532,
"cds_start": 206,
"cds_end": null,
"cds_length": 1599,
"cdna_start": 897,
"cdna_end": null,
"cdna_length": 2804,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "n.398T>C",
"hgvs_p": null,
"transcript": "ENST00000598254.1",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 529,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ZNF350",
"gene_hgnc_id": 16656,
"hgvs_c": "n.434T>C",
"hgvs_p": null,
"transcript": "ENST00000600703.5",
"protein_id": null,
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 579,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.103-7781A>G",
"hgvs_p": null,
"transcript": "ENST00000600253.1",
"protein_id": null,
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
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"cdna_length": 577,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.92-7781A>G",
"hgvs_p": null,
"transcript": "ENST00000658402.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4562,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.90-7781A>G",
"hgvs_p": null,
"transcript": "ENST00000661211.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2645,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.109-7363A>G",
"hgvs_p": null,
"transcript": "ENST00000692818.2",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 480,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.115-12317A>G",
"hgvs_p": null,
"transcript": "ENST00000797553.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 555,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.54-2486A>G",
"hgvs_p": null,
"transcript": "ENST00000797554.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 748,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.140-7781A>G",
"hgvs_p": null,
"transcript": "ENST00000797555.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 763,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF350-AS1",
"gene_hgnc_id": 48598,
"hgvs_c": "n.49-7781A>G",
"hgvs_p": null,
"transcript": "ENST00000797556.1",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 322,
"mane_select": null,
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}
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}