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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 19-804554-C-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=19&pos=804554&ref=C&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "19",
      "pos": 804554,
      "ref": "C",
      "alt": "T",
      "effect": "missense_variant",
      "transcript": "NM_002819.5",
      "consequences": [
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.458C>T",
          "hgvs_p": "p.Ala153Val",
          "transcript": "NM_002819.5",
          "protein_id": "NP_002810.1",
          "transcript_support_level": null,
          "aa_start": 153,
          "aa_end": null,
          "aa_length": 557,
          "cds_start": 458,
          "cds_end": null,
          "cds_length": 1674,
          "cdna_start": 504,
          "cdna_end": null,
          "cdna_length": 3206,
          "mane_select": "ENST00000356948.11",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.458C>T",
          "hgvs_p": "p.Ala153Val",
          "transcript": "ENST00000356948.11",
          "protein_id": "ENSP00000349428.4",
          "transcript_support_level": 1,
          "aa_start": 153,
          "aa_end": null,
          "aa_length": 557,
          "cds_start": 458,
          "cds_end": null,
          "cds_length": 1674,
          "cdna_start": 504,
          "cdna_end": null,
          "cdna_length": 3206,
          "mane_select": "NM_002819.5",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.458C>T",
          "hgvs_p": "p.Ala153Val",
          "transcript": "ENST00000394601.8",
          "protein_id": "ENSP00000408096.1",
          "transcript_support_level": 1,
          "aa_start": 153,
          "aa_end": null,
          "aa_length": 550,
          "cds_start": 458,
          "cds_end": null,
          "cds_length": 1653,
          "cdna_start": 504,
          "cdna_end": null,
          "cdna_length": 3185,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.458C>T",
          "hgvs_p": "p.Ala153Val",
          "transcript": "ENST00000349038.8",
          "protein_id": "ENSP00000014112.5",
          "transcript_support_level": 1,
          "aa_start": 153,
          "aa_end": null,
          "aa_length": 531,
          "cds_start": 458,
          "cds_end": null,
          "cds_length": 1596,
          "cdna_start": 531,
          "cdna_end": null,
          "cdna_length": 3155,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.368C>T",
          "hgvs_p": "p.Ala123Val",
          "transcript": "ENST00000350092.8",
          "protein_id": "ENSP00000342332.5",
          "transcript_support_level": 1,
          "aa_start": 123,
          "aa_end": null,
          "aa_length": 527,
          "cds_start": 368,
          "cds_end": null,
          "cds_length": 1584,
          "cdna_start": 457,
          "cdna_end": null,
          "cdna_length": 3069,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.551C>T",
          "hgvs_p": "p.Ala184Val",
          "transcript": "ENST00000635647.1",
          "protein_id": "ENSP00000489604.1",
          "transcript_support_level": 5,
          "aa_start": 184,
          "aa_end": null,
          "aa_length": 588,
          "cds_start": 551,
          "cds_end": null,
          "cds_length": 1767,
          "cdna_start": 974,
          "cdna_end": null,
          "cdna_length": 3691,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.464C>T",
          "hgvs_p": "p.Ala155Val",
          "transcript": "NM_001411140.1",
          "protein_id": "NP_001398069.1",
          "transcript_support_level": null,
          "aa_start": 155,
          "aa_end": null,
          "aa_length": 559,
          "cds_start": 464,
          "cds_end": null,
          "cds_length": 1680,
          "cdna_start": 1012,
          "cdna_end": null,
          "cdna_length": 3714,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.464C>T",
          "hgvs_p": "p.Ala155Val",
          "transcript": "ENST00000679114.1",
          "protein_id": "ENSP00000504829.1",
          "transcript_support_level": null,
          "aa_start": 155,
          "aa_end": null,
          "aa_length": 559,
          "cds_start": 464,
          "cds_end": null,
          "cds_length": 1680,
          "cdna_start": 568,
          "cdna_end": null,
          "cdna_length": 3233,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.458C>T",
          "hgvs_p": "p.Ala153Val",
          "transcript": "NM_031990.4",
          "protein_id": "NP_114367.1",
          "transcript_support_level": null,
          "aa_start": 153,
          "aa_end": null,
          "aa_length": 550,
          "cds_start": 458,
          "cds_end": null,
          "cds_length": 1653,
          "cdna_start": 504,
          "cdna_end": null,
          "cdna_length": 3185,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.458C>T",
          "hgvs_p": "p.Ala153Val",
          "transcript": "NM_031991.4",
          "protein_id": "NP_114368.1",
          "transcript_support_level": null,
          "aa_start": 153,
          "aa_end": null,
          "aa_length": 531,
          "cds_start": 458,
          "cds_end": null,
          "cds_length": 1596,
          "cdna_start": 504,
          "cdna_end": null,
          "cdna_length": 3128,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.449C>T",
          "hgvs_p": "p.Ala150Val",
          "transcript": "ENST00000589575.5",
          "protein_id": "ENSP00000465652.2",
          "transcript_support_level": 3,
          "aa_start": 150,
          "aa_end": null,
          "aa_length": 236,
          "cds_start": 449,
          "cds_end": null,
          "cds_length": 713,
          "cdna_start": 485,
          "cdna_end": null,
          "cdna_length": 749,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.368C>T",
          "hgvs_p": "p.Ala123Val",
          "transcript": "ENST00000586481.5",
          "protein_id": "ENSP00000468565.3",
          "transcript_support_level": 3,
          "aa_start": 123,
          "aa_end": null,
          "aa_length": 148,
          "cds_start": 368,
          "cds_end": null,
          "cds_length": 448,
          "cdna_start": 498,
          "cdna_end": null,
          "cdna_length": 578,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.464C>T",
          "hgvs_p": "p.Ala155Val",
          "transcript": "XM_005259598.3",
          "protein_id": "XP_005259655.1",
          "transcript_support_level": null,
          "aa_start": 155,
          "aa_end": null,
          "aa_length": 533,
          "cds_start": 464,
          "cds_end": null,
          "cds_length": 1602,
          "cdna_start": 1067,
          "cdna_end": null,
          "cdna_length": 3691,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "A",
          "aa_alt": "V",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.464C>T",
          "hgvs_p": "p.Ala155Val",
          "transcript": "XM_047439114.1",
          "protein_id": "XP_047295070.1",
          "transcript_support_level": null,
          "aa_start": 155,
          "aa_end": null,
          "aa_length": 383,
          "cds_start": 464,
          "cds_end": null,
          "cds_length": 1152,
          "cdna_start": 1067,
          "cdna_end": null,
          "cdna_length": 1768,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "n.528C>T",
          "hgvs_p": null,
          "transcript": "ENST00000586944.5",
          "protein_id": null,
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
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          "cdna_start": null,
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          "cdna_length": 4661,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "n.614C>T",
          "hgvs_p": null,
          "transcript": "ENST00000590887.5",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 642,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "n.581C>T",
          "hgvs_p": null,
          "transcript": "ENST00000592113.5",
          "protein_id": null,
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1548,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "n.558C>T",
          "hgvs_p": null,
          "transcript": "ENST00000592804.2",
          "protein_id": null,
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 1556,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "n.71C>T",
          "hgvs_p": null,
          "transcript": "ENST00000621737.4",
          "protein_id": "ENSP00000478414.1",
          "transcript_support_level": 5,
          "aa_start": null,
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          "aa_length": null,
          "cds_start": -4,
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          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 1125,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "n.458C>T",
          "hgvs_p": null,
          "transcript": "ENST00000676227.1",
          "protein_id": "ENSP00000501551.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3275,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "n.458C>T",
          "hgvs_p": null,
          "transcript": "ENST00000677277.1",
          "protein_id": "ENSP00000504032.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
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          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 3194,
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        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
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          ],
          "exon_rank": null,
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          "exon_count": 7,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.40-3315C>T",
          "hgvs_p": null,
          "transcript": "ENST00000627714.2",
          "protein_id": "ENSP00000486218.1",
          "transcript_support_level": 5,
          "aa_start": null,
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          "aa_length": 197,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 594,
          "cdna_start": null,
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          "cdna_length": 2201,
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        },
        {
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          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
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          "exon_count": 3,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.231+346C>T",
          "hgvs_p": null,
          "transcript": "ENST00000585535.2",
          "protein_id": "ENSP00000466250.2",
          "transcript_support_level": 3,
          "aa_start": null,
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          "aa_length": 103,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 312,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 314,
          "mane_select": null,
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        },
        {
          "aa_ref": null,
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          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
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          "exon_count": 4,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.-65-3806C>T",
          "hgvs_p": null,
          "transcript": "ENST00000587191.3",
          "protein_id": "ENSP00000478974.1",
          "transcript_support_level": 5,
          "aa_start": null,
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          "aa_length": 80,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 245,
          "cdna_start": null,
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          "cdna_length": 357,
          "mane_select": null,
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          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "upstream_gene_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "PTBP1",
          "gene_hgnc_id": 9583,
          "hgvs_c": "c.-71C>T",
          "hgvs_p": null,
          "transcript": "ENST00000585956.5",
          "protein_id": "ENSP00000465451.1",
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 254,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 765,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 767,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "PTBP1",
      "gene_hgnc_id": 9583,
      "dbsnp": "rs1295072402",
      "frequency_reference_population": 0.0000061905366,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 9,
      "gnomad_exomes_af": 0.00000619054,
      "gnomad_genomes_af": null,
      "gnomad_exomes_ac": 9,
      "gnomad_genomes_ac": null,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": null,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.2804564833641052,
      "computational_prediction_selected": "Benign",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0.029999999329447746,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.103,
      "revel_prediction": "Benign",
      "alphamissense_score": 0.7298,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": 0.02,
      "bayesdelnoaf_prediction": "Uncertain_significance",
      "phylop100way_score": 5.965,
      "phylop100way_prediction": "Uncertain_significance",
      "spliceai_max_score": 0.03,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -5,
      "acmg_classification": "Likely_benign",
      "acmg_criteria": "BP4,BS2",
      "acmg_by_gene": [
        {
          "score": -5,
          "benign_score": 5,
          "pathogenic_score": 0,
          "criteria": [
            "BP4",
            "BS2"
          ],
          "verdict": "Likely_benign",
          "transcript": "NM_002819.5",
          "gene_symbol": "PTBP1",
          "hgnc_id": 9583,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AD",
          "hgvs_c": "c.458C>T",
          "hgvs_p": "p.Ala153Val"
        }
      ],
      "clinvar_disease": "not specified",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "US:1",
      "phenotype_combined": "not specified",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}