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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 2-119364764-T-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=2&pos=119364764&ref=T&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "2",
      "pos": 119364764,
      "ref": "T",
      "alt": "C",
      "effect": "intron_variant",
      "transcript": "NM_001017927.4",
      "consequences": [
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+2026A>G",
          "hgvs_p": null,
          "transcript": "NM_001322331.2",
          "protein_id": "NP_001309260.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000334816.12",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001322331.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+2026A>G",
          "hgvs_p": null,
          "transcript": "ENST00000334816.12",
          "protein_id": "ENSP00000335041.7",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_001322331.2",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000334816.12"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-216+1672A>G",
          "hgvs_p": null,
          "transcript": "ENST00000409466.6",
          "protein_id": "ENSP00000386302.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000409466.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+1593A>G",
          "hgvs_p": null,
          "transcript": "ENST00000409523.1",
          "protein_id": "ENSP00000386714.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000409523.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-216+1593A>G",
          "hgvs_p": null,
          "transcript": "ENST00000409877.5",
          "protein_id": "ENSP00000387234.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000409877.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "5_prime_UTR_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-1087A>G",
          "hgvs_p": null,
          "transcript": "ENST00000967573.1",
          "protein_id": "ENSP00000637632.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000967573.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+2026A>G",
          "hgvs_p": null,
          "transcript": "ENST00000878327.1",
          "protein_id": "ENSP00000548386.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 159,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 480,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000878327.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+2026A>G",
          "hgvs_p": null,
          "transcript": "ENST00000967572.1",
          "protein_id": "ENSP00000637631.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 159,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 480,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000967572.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+2026A>G",
          "hgvs_p": null,
          "transcript": "ENST00000937464.1",
          "protein_id": "ENSP00000607523.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 142,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 429,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000937464.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-216+1593A>G",
          "hgvs_p": null,
          "transcript": "NM_001017927.4",
          "protein_id": "NP_001017927.2",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001017927.4"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-216+1672A>G",
          "hgvs_p": null,
          "transcript": "NM_001322329.2",
          "protein_id": "NP_001309258.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 126,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 381,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001322329.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
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          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+1593A>G",
          "hgvs_p": null,
          "transcript": "NM_001322330.2",
          "protein_id": "NP_001309259.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": 126,
          "cds_start": null,
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          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
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        },
        {
          "aa_ref": null,
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          "canonical": false,
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          "strand": false,
          "consequences": [
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          ],
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          "intron_rank": 1,
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          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-216+2026A>G",
          "hgvs_p": null,
          "transcript": "ENST00000878329.1",
          "protein_id": "ENSP00000548388.1",
          "transcript_support_level": null,
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          "cds_start": null,
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          "biotype": "protein_coding",
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        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": true,
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          "consequences": [
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          ],
          "exon_rank": null,
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          "exon_count": 7,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-73+1593A>G",
          "hgvs_p": null,
          "transcript": "ENST00000878330.1",
          "protein_id": "ENSP00000548389.1",
          "transcript_support_level": null,
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          "cds_start": null,
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        {
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          "gene_symbol": "C2orf76",
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        {
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          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+2026A>G",
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          "transcript": "NM_001322332.2",
          "protein_id": "NP_001309261.1",
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          "aa_length": 109,
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          "biotype": "protein_coding",
          "feature": "NM_001322332.2"
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        {
          "aa_ref": null,
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          ],
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          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+2026A>G",
          "hgvs_p": null,
          "transcript": "ENST00000878326.1",
          "protein_id": "ENSP00000548385.1",
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          "gene_symbol": "C2orf76",
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        {
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          "gene_symbol": "C2orf76",
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        {
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          "protein_coding": true,
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          "consequences": [
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          ],
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          "exon_count": 5,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "C2orf76",
          "gene_hgnc_id": 27017,
          "hgvs_c": "c.-13+1672A>G",
          "hgvs_p": null,
          "transcript": "ENST00000937466.1",
          "protein_id": "ENSP00000607525.1",
          "transcript_support_level": null,
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          "cds_start": null,
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          "cds_length": 330,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "ENST00000937466.1"
        },
        {
          "aa_ref": null,
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          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
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      "clinvar_disease": "",
      "clinvar_classification": "",
      "clinvar_review_status": "",
      "clinvar_submissions_summary": "",
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      "custom_annotations": null
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  ],
  "message": null
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.