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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 2-190659640-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=2&pos=190659640&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "2",
"pos": 190659640,
"ref": "T",
"alt": "C",
"effect": "missense_variant",
"transcript": "NM_005966.4",
"consequences": [
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "NM_005966.4",
"protein_id": "NP_005957.2",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 1075,
"cdna_end": null,
"cdna_length": 4508,
"mane_select": "ENST00000337386.10",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_005966.4"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000337386.10",
"protein_id": "ENSP00000336894.5",
"transcript_support_level": 1,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 1075,
"cdna_end": null,
"cdna_length": 4508,
"mane_select": "NM_005966.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000337386.10"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000409641.5",
"protein_id": "ENSP00000386682.1",
"transcript_support_level": 1,
"aa_start": 155,
"aa_end": null,
"aa_length": 486,
"cds_start": 464,
"cds_end": null,
"cds_length": 1461,
"cdna_start": 582,
"cdna_end": null,
"cdna_length": 2472,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000409641.5"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903121.1",
"protein_id": "ENSP00000573180.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 498,
"cds_start": 464,
"cds_end": null,
"cds_length": 1497,
"cdna_start": 770,
"cdna_end": null,
"cdna_length": 4235,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903121.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "NM_001321312.2",
"protein_id": "NP_001308241.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 761,
"cdna_end": null,
"cdna_length": 4194,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001321312.2"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "NM_001321313.1",
"protein_id": "NP_001308242.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 560,
"cdna_end": null,
"cdna_length": 3993,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001321313.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000409581.5",
"protein_id": "ENSP00000387089.1",
"transcript_support_level": 2,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 774,
"cdna_end": null,
"cdna_length": 2360,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000409581.5"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903108.1",
"protein_id": "ENSP00000573167.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 732,
"cdna_end": null,
"cdna_length": 4165,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903108.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903109.1",
"protein_id": "ENSP00000573168.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 713,
"cdna_end": null,
"cdna_length": 4146,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903109.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903110.1",
"protein_id": "ENSP00000573169.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 576,
"cdna_end": null,
"cdna_length": 4009,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903110.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903111.1",
"protein_id": "ENSP00000573170.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 766,
"cdna_end": null,
"cdna_length": 4197,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903111.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903112.1",
"protein_id": "ENSP00000573171.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 746,
"cdna_end": null,
"cdna_length": 4179,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903112.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903113.1",
"protein_id": "ENSP00000573172.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 927,
"cdna_end": null,
"cdna_length": 4358,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903113.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903116.1",
"protein_id": "ENSP00000573175.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 937,
"cdna_end": null,
"cdna_length": 4367,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903116.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903118.1",
"protein_id": "ENSP00000573177.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 931,
"cdna_end": null,
"cdna_length": 4364,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903118.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903119.1",
"protein_id": "ENSP00000573178.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 955,
"cdna_end": null,
"cdna_length": 4388,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903119.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903120.1",
"protein_id": "ENSP00000573179.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 1000,
"cdna_end": null,
"cdna_length": 4184,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903120.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903122.1",
"protein_id": "ENSP00000573181.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 845,
"cdna_end": null,
"cdna_length": 4041,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903122.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903123.1",
"protein_id": "ENSP00000573182.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 1087,
"cdna_end": null,
"cdna_length": 4522,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903123.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903126.1",
"protein_id": "ENSP00000573185.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
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"cdna_start": 762,
"cdna_end": null,
"cdna_length": 4195,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903126.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903128.1",
"protein_id": "ENSP00000573187.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 1143,
"cdna_end": null,
"cdna_length": 4576,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903128.1"
},
{
"aa_ref": "V",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NAB1",
"gene_hgnc_id": 7626,
"hgvs_c": "c.464T>C",
"hgvs_p": "p.Val155Ala",
"transcript": "ENST00000903129.1",
"protein_id": "ENSP00000573188.1",
"transcript_support_level": null,
"aa_start": 155,
"aa_end": null,
"aa_length": 487,
"cds_start": 464,
"cds_end": null,
"cds_length": 1464,
"cdna_start": 616,
"cdna_end": null,
"cdna_length": 4049,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000903129.1"
},
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