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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 2-237644330-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=2&pos=237644330&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "2",
"pos": 237644330,
"ref": "C",
"alt": "T",
"effect": "intron_variant",
"transcript": "NM_001137550.2",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "NM_001137550.2",
"protein_id": "NP_001131022.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 640,
"cds_start": null,
"cds_end": null,
"cds_length": 1923,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000308482.14",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001137550.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000308482.14",
"protein_id": "ENSP00000310109.9",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 640,
"cds_start": null,
"cds_end": null,
"cds_length": 1923,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001137550.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000308482.14"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970858.1",
"protein_id": "ENSP00000640917.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 692,
"cds_start": null,
"cds_end": null,
"cds_length": 2079,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970858.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970877.1",
"protein_id": "ENSP00000640936.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 687,
"cds_start": null,
"cds_end": null,
"cds_length": 2064,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970877.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970849.1",
"protein_id": "ENSP00000640908.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 681,
"cds_start": null,
"cds_end": null,
"cds_length": 2046,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970849.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000863735.1",
"protein_id": "ENSP00000533794.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 672,
"cds_start": null,
"cds_end": null,
"cds_length": 2019,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000863735.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970865.1",
"protein_id": "ENSP00000640924.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 666,
"cds_start": null,
"cds_end": null,
"cds_length": 2001,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970865.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000863717.1",
"protein_id": "ENSP00000533776.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 661,
"cds_start": null,
"cds_end": null,
"cds_length": 1986,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000863717.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970850.1",
"protein_id": "ENSP00000640909.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 660,
"cds_start": null,
"cds_end": null,
"cds_length": 1983,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970850.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970925.1",
"protein_id": "ENSP00000640984.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 659,
"cds_start": null,
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"cds_length": 1980,
"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970925.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 1,
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"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970909.1",
"protein_id": "ENSP00000640968.1",
"transcript_support_level": null,
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
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},
{
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"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"gene_symbol": "LRRFIP1",
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"hgvs_c": "c.96+16590C>T",
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"transcript": "ENST00000970847.1",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 1,
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"gene_symbol": "LRRFIP1",
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"hgvs_c": "c.96+16590C>T",
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"protein_id": "ENSP00000640979.1",
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"cds_start": null,
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"feature": "ENST00000970920.1"
},
{
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"strand": true,
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],
"exon_rank": null,
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"gene_symbol": "LRRFIP1",
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"hgvs_c": "c.96+16590C>T",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"intron_rank": 1,
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"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000863738.1",
"protein_id": "ENSP00000533797.1",
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"aa_start": null,
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"feature": "ENST00000863738.1"
},
{
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"strand": true,
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],
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"intron_rank": 1,
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"gene_symbol": "LRRFIP1",
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"hgvs_c": "c.96+16590C>T",
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 1,
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"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000863708.1",
"protein_id": "ENSP00000533767.1",
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"feature": "ENST00000863708.1"
},
{
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"strand": true,
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],
"exon_rank": null,
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"exon_count": 24,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970842.1",
"protein_id": "ENSP00000640901.1",
"transcript_support_level": null,
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},
{
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],
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"gene_symbol": "LRRFIP1",
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},
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],
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"gene_symbol": "LRRFIP1",
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"hgvs_c": "c.96+16590C>T",
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"transcript": "ENST00000970927.1",
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},
{
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"strand": true,
"consequences": [
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],
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"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970867.1",
"protein_id": "ENSP00000640926.1",
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970867.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 23,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "LRRFIP1",
"gene_hgnc_id": 6702,
"hgvs_c": "c.96+16590C>T",
"hgvs_p": null,
"transcript": "ENST00000970897.1",
"protein_id": "ENSP00000640956.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000970897.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
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