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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 2-25390277-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=2&pos=25390277&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "2",
"pos": 25390277,
"ref": "T",
"alt": "C",
"effect": "intron_variant",
"transcript": "NM_021907.5",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1576-1916A>G",
"hgvs_p": null,
"transcript": "NM_021907.5",
"protein_id": "NP_068707.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 627,
"cds_start": null,
"cds_end": null,
"cds_length": 1884,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000406818.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_021907.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1576-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000406818.8",
"protein_id": "ENSP00000384084.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 627,
"cds_start": null,
"cds_end": null,
"cds_length": 1884,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_021907.5",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000406818.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1576-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000407661.7",
"protein_id": "ENSP00000385193.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 609,
"cds_start": null,
"cds_end": null,
"cds_length": 1830,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000407661.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1486-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000407038.7",
"protein_id": "ENSP00000384767.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 567,
"cds_start": null,
"cds_end": null,
"cds_length": 1704,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000407038.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1465-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000405222.5",
"protein_id": "ENSP00000384787.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 560,
"cds_start": null,
"cds_end": null,
"cds_length": 1683,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000405222.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "n.*950-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000398951.6",
"protein_id": "ENSP00000381924.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000398951.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1678-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000885594.1",
"protein_id": "ENSP00000555653.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 661,
"cds_start": null,
"cds_end": null,
"cds_length": 1986,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885594.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1660-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000920926.1",
"protein_id": "ENSP00000590985.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 637,
"cds_start": null,
"cds_end": null,
"cds_length": 1914,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000920926.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1573-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000885595.1",
"protein_id": "ENSP00000555654.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 626,
"cds_start": null,
"cds_end": null,
"cds_length": 1881,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885595.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1576-1916A>G",
"hgvs_p": null,
"transcript": "NM_001320936.2",
"protein_id": "NP_001307865.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 625,
"cds_start": null,
"cds_end": null,
"cds_length": 1878,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001320936.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1573-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000885586.1",
"protein_id": "ENSP00000555645.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 625,
"cds_start": null,
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"cds_length": 1878,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885586.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 20,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1555-1916A>G",
"hgvs_p": null,
"transcript": "NM_001256303.2",
"protein_id": "NP_001243232.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 620,
"cds_start": null,
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"cds_length": 1863,
"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001256303.2"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1555-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000288642.12",
"protein_id": "ENSP00000288642.9",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": 620,
"cds_start": null,
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"cds_length": 1863,
"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000288642.12"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 20,
"intron_rank": 15,
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"gene_symbol": "DTNB",
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"hgvs_c": "c.1555-1916A>G",
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"transcript": "ENST00000885602.1",
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 20,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1555-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000885590.1",
"protein_id": "ENSP00000555649.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 619,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000885590.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 21,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1606-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000953659.1",
"protein_id": "ENSP00000623718.1",
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000953659.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1585-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000885588.1",
"protein_id": "ENSP00000555647.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885588.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1576-10954A>G",
"hgvs_p": null,
"transcript": "NM_001351394.2",
"protein_id": "NP_001338323.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 610,
"cds_start": null,
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"biotype": "protein_coding",
"feature": "NM_001351394.2"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 20,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1576-1916A>G",
"hgvs_p": null,
"transcript": "NM_183360.3",
"protein_id": "NP_899204.1",
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"feature": "NM_183360.3"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 20,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1576-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000953665.1",
"protein_id": "ENSP00000623724.1",
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"biotype": "protein_coding",
"feature": "ENST00000953665.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
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"hgvs_c": "c.1573-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000885589.1",
"protein_id": "ENSP00000555648.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885589.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "DTNB",
"gene_hgnc_id": 3058,
"hgvs_c": "c.1573-1916A>G",
"hgvs_p": null,
"transcript": "ENST00000885604.1",
"protein_id": "ENSP00000555663.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 608,
"cds_start": null,
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"cds_length": 1827,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000885604.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 15,
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