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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 2-3643807-T-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=2&pos=3643807&ref=T&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "2",
      "pos": 3643807,
      "ref": "T",
      "alt": "C",
      "effect": "missense_variant",
      "transcript": "ENST00000349077.9",
      "consequences": [
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.505T>C",
          "hgvs_p": "p.Ser169Pro",
          "transcript": "NM_024027.5",
          "protein_id": "NP_076932.1",
          "transcript_support_level": null,
          "aa_start": 169,
          "aa_end": null,
          "aa_length": 271,
          "cds_start": 505,
          "cds_end": null,
          "cds_length": 816,
          "cdna_start": 588,
          "cdna_end": null,
          "cdna_length": 1425,
          "mane_select": "ENST00000349077.9",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.505T>C",
          "hgvs_p": "p.Ser169Pro",
          "transcript": "ENST00000349077.9",
          "protein_id": "ENSP00000339168.4",
          "transcript_support_level": 1,
          "aa_start": 169,
          "aa_end": null,
          "aa_length": 271,
          "cds_start": 505,
          "cds_end": null,
          "cds_length": 816,
          "cdna_start": 588,
          "cdna_end": null,
          "cdna_length": 1425,
          "mane_select": "NM_024027.5",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.496T>C",
          "hgvs_p": "p.Ser166Pro",
          "transcript": "ENST00000236693.11",
          "protein_id": "ENSP00000236693.7",
          "transcript_support_level": 1,
          "aa_start": 166,
          "aa_end": null,
          "aa_length": 268,
          "cds_start": 496,
          "cds_end": null,
          "cds_length": 807,
          "cdna_start": 730,
          "cdna_end": null,
          "cdna_length": 1381,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.433T>C",
          "hgvs_p": "p.Ser145Pro",
          "transcript": "ENST00000382062.6",
          "protein_id": "ENSP00000371494.2",
          "transcript_support_level": 1,
          "aa_start": 145,
          "aa_end": null,
          "aa_length": 247,
          "cds_start": 433,
          "cds_end": null,
          "cds_length": 744,
          "cdna_start": 796,
          "cdna_end": null,
          "cdna_length": 1633,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.427T>C",
          "hgvs_p": "p.Ser143Pro",
          "transcript": "ENST00000403096.7",
          "protein_id": "ENSP00000385130.3",
          "transcript_support_level": 1,
          "aa_start": 143,
          "aa_end": null,
          "aa_length": 245,
          "cds_start": 427,
          "cds_end": null,
          "cds_length": 738,
          "cdna_start": 918,
          "cdna_end": null,
          "cdna_length": 1557,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.355T>C",
          "hgvs_p": "p.Ser119Pro",
          "transcript": "ENST00000402794.4",
          "protein_id": "ENSP00000384882.1",
          "transcript_support_level": 1,
          "aa_start": 119,
          "aa_end": null,
          "aa_length": 221,
          "cds_start": 355,
          "cds_end": null,
          "cds_length": 666,
          "cdna_start": 495,
          "cdna_end": null,
          "cdna_length": 1134,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.355T>C",
          "hgvs_p": "p.Ser119Pro",
          "transcript": "ENST00000402922.2",
          "protein_id": "ENSP00000385653.1",
          "transcript_support_level": 1,
          "aa_start": 119,
          "aa_end": null,
          "aa_length": 221,
          "cds_start": 355,
          "cds_end": null,
          "cds_length": 666,
          "cdna_start": 495,
          "cdna_end": null,
          "cdna_length": 1134,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.283T>C",
          "hgvs_p": "p.Ser95Pro",
          "transcript": "ENST00000404205.5",
          "protein_id": "ENSP00000385827.1",
          "transcript_support_level": 1,
          "aa_start": 95,
          "aa_end": null,
          "aa_length": 197,
          "cds_start": 283,
          "cds_end": null,
          "cds_length": 594,
          "cdna_start": 423,
          "cdna_end": null,
          "cdna_length": 1062,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "n.601T>C",
          "hgvs_p": null,
          "transcript": "ENST00000460971.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1240,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "n.673T>C",
          "hgvs_p": null,
          "transcript": "ENST00000487365.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1312,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.547T>C",
          "hgvs_p": "p.Ser183Pro",
          "transcript": "NM_001255985.1",
          "protein_id": "NP_001242914.1",
          "transcript_support_level": null,
          "aa_start": 183,
          "aa_end": null,
          "aa_length": 285,
          "cds_start": 547,
          "cds_end": null,
          "cds_length": 858,
          "cdna_start": 758,
          "cdna_end": null,
          "cdna_length": 1595,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.547T>C",
          "hgvs_p": "p.Ser183Pro",
          "transcript": "ENST00000418971.6",
          "protein_id": "ENSP00000411770.2",
          "transcript_support_level": 2,
          "aa_start": 183,
          "aa_end": null,
          "aa_length": 285,
          "cds_start": 547,
          "cds_end": null,
          "cds_length": 858,
          "cdna_start": 758,
          "cdna_end": null,
          "cdna_length": 1595,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.496T>C",
          "hgvs_p": "p.Ser166Pro",
          "transcript": "NM_199235.3",
          "protein_id": "NP_954705.1",
          "transcript_support_level": null,
          "aa_start": 166,
          "aa_end": null,
          "aa_length": 268,
          "cds_start": 496,
          "cds_end": null,
          "cds_length": 807,
          "cdna_start": 667,
          "cdna_end": null,
          "cdna_length": 1504,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.433T>C",
          "hgvs_p": "p.Ser145Pro",
          "transcript": "NM_001255982.2",
          "protein_id": "NP_001242911.1",
          "transcript_support_level": null,
          "aa_start": 145,
          "aa_end": null,
          "aa_length": 247,
          "cds_start": 433,
          "cds_end": null,
          "cds_length": 744,
          "cdna_start": 516,
          "cdna_end": null,
          "cdna_length": 1353,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
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          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.433T>C",
          "hgvs_p": "p.Ser145Pro",
          "transcript": "NM_001255983.2",
          "protein_id": "NP_001242912.1",
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          "cds_start": 433,
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          "cdna_start": 516,
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          "cdna_length": 1353,
          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.427T>C",
          "hgvs_p": "p.Ser143Pro",
          "transcript": "NM_001255986.1",
          "protein_id": "NP_001242915.1",
          "transcript_support_level": null,
          "aa_start": 143,
          "aa_end": null,
          "aa_length": 245,
          "cds_start": 427,
          "cds_end": null,
          "cds_length": 738,
          "cdna_start": 567,
          "cdna_end": null,
          "cdna_length": 1404,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.361T>C",
          "hgvs_p": "p.Ser121Pro",
          "transcript": "NM_001255984.2",
          "protein_id": "NP_001242913.1",
          "transcript_support_level": null,
          "aa_start": 121,
          "aa_end": null,
          "aa_length": 223,
          "cds_start": 361,
          "cds_end": null,
          "cds_length": 672,
          "cdna_start": 444,
          "cdna_end": null,
          "cdna_length": 1281,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.355T>C",
          "hgvs_p": "p.Ser119Pro",
          "transcript": "NM_001255987.1",
          "protein_id": "NP_001242916.1",
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          "aa_start": 119,
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          "cdna_start": 495,
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          "biotype": null,
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        },
        {
          "aa_ref": "S",
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          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.355T>C",
          "hgvs_p": "p.Ser119Pro",
          "transcript": "NM_001255988.1",
          "protein_id": "NP_001242917.1",
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          "cdna_start": 495,
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          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.283T>C",
          "hgvs_p": "p.Ser95Pro",
          "transcript": "NM_001255989.1",
          "protein_id": "NP_001242918.1",
          "transcript_support_level": null,
          "aa_start": 95,
          "aa_end": null,
          "aa_length": 197,
          "cds_start": 283,
          "cds_end": null,
          "cds_length": 594,
          "cdna_start": 423,
          "cdna_end": null,
          "cdna_length": 1260,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.475T>C",
          "hgvs_p": "p.Ser159Pro",
          "transcript": "XM_005263853.5",
          "protein_id": "XP_005263910.1",
          "transcript_support_level": null,
          "aa_start": 159,
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          "aa_length": 261,
          "cds_start": 475,
          "cds_end": null,
          "cds_length": 786,
          "cdna_start": 568,
          "cdna_end": null,
          "cdna_length": 1405,
          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "S",
          "aa_alt": "P",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "c.475T>C",
          "hgvs_p": "p.Ser159Pro",
          "transcript": "XM_006711897.4",
          "protein_id": "XP_006711960.1",
          "transcript_support_level": null,
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          "aa_end": null,
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          "cdna_start": 568,
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          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "n.*347T>C",
          "hgvs_p": null,
          "transcript": "ENST00000416132.5",
          "protein_id": "ENSP00000410919.1",
          "transcript_support_level": 5,
          "aa_start": null,
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          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1378,
          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "n.781T>C",
          "hgvs_p": null,
          "transcript": "NR_045659.2",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1618,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "COLEC11",
          "gene_hgnc_id": 17213,
          "hgvs_c": "n.*347T>C",
          "hgvs_p": null,
          "transcript": "ENST00000416132.5",
          "protein_id": "ENSP00000410919.1",
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1378,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "COLEC11",
      "gene_hgnc_id": 17213,
      "dbsnp": "rs387907075",
      "frequency_reference_population": null,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 0,
      "gnomad_exomes_af": null,
      "gnomad_genomes_af": null,
      "gnomad_exomes_ac": null,
      "gnomad_genomes_ac": null,
      "gnomad_exomes_homalt": null,
      "gnomad_genomes_homalt": null,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.43026360869407654,
      "computational_prediction_selected": "Uncertain_significance",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.231,
      "revel_prediction": "Benign",
      "alphamissense_score": 0.7305,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.26,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 1.822,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": 3,
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PM2,PP5",
      "acmg_by_gene": [
        {
          "score": 3,
          "benign_score": 0,
          "pathogenic_score": 3,
          "criteria": [
            "PM2",
            "PP5"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "ENST00000349077.9",
          "gene_symbol": "COLEC11",
          "hgnc_id": 17213,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.505T>C",
          "hgvs_p": "p.Ser169Pro"
        }
      ],
      "clinvar_disease": "3MC syndrome 2",
      "clinvar_classification": "Pathogenic",
      "clinvar_review_status": "no assertion criteria provided",
      "clinvar_submissions_summary": "null",
      "phenotype_combined": "3MC syndrome 2",
      "pathogenicity_classification_combined": "Pathogenic",
      "custom_annotations": null
    }
  ],
  "message": null
}