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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 20-25226018-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=20&pos=25226018&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "20",
"pos": 25226018,
"ref": "A",
"alt": "G",
"effect": "3_prime_UTR_variant",
"transcript": "ENST00000376652.9",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001247.5",
"protein_id": "NP_001238.3",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": -4,
"cds_end": null,
"cds_length": 1455,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4104,
"mane_select": "ENST00000376652.9",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "ENST00000376652.9",
"protein_id": "ENSP00000365840.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": -4,
"cds_end": null,
"cds_length": 1455,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4104,
"mane_select": "NM_001247.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "ENST00000360031.6",
"protein_id": "ENSP00000353131.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 483,
"cds_start": -4,
"cds_end": null,
"cds_length": 1452,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2766,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "ENST00000354989.10",
"protein_id": "ENSP00000347084.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 456,
"cds_start": -4,
"cds_end": null,
"cds_length": 1371,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2708,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "n.1877A>G",
"hgvs_p": null,
"transcript": "ENST00000485936.5",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2588,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 2,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "n.1207A>G",
"hgvs_p": null,
"transcript": "ENST00000490187.1",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1918,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322378.2",
"protein_id": "NP_001309307.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": -4,
"cds_end": null,
"cds_length": 1455,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4230,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001317941.3",
"protein_id": "NP_001304870.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 483,
"cds_start": -4,
"cds_end": null,
"cds_length": 1452,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4101,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322398.2",
"protein_id": "NP_001309327.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 481,
"cds_start": -4,
"cds_end": null,
"cds_length": 1446,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4161,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*503A>G",
"hgvs_p": null,
"transcript": "NM_001322397.2",
"protein_id": "NP_001309326.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 471,
"cds_start": -4,
"cds_end": null,
"cds_length": 1416,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4147,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*503A>G",
"hgvs_p": null,
"transcript": "NM_001322396.2",
"protein_id": "NP_001309325.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 470,
"cds_start": -4,
"cds_end": null,
"cds_length": 1413,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4144,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*503A>G",
"hgvs_p": null,
"transcript": "NM_001322395.2",
"protein_id": "NP_001309324.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 468,
"cds_start": -4,
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"cds_length": 1407,
"cdna_start": null,
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"cdna_length": 4204,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001114089.4",
"protein_id": "NP_001107561.2",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 467,
"cds_start": -4,
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"cds_length": 1404,
"cdna_start": null,
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"cdna_length": 4035,
"mane_select": null,
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"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322394.2",
"protein_id": "NP_001309323.2",
"transcript_support_level": null,
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"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
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"exon_count": 14,
"intron_rank": null,
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"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*503A>G",
"hgvs_p": null,
"transcript": "NM_001322393.2",
"protein_id": "NP_001309322.2",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 454,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*503A>G",
"hgvs_p": null,
"transcript": "NM_001322392.2",
"protein_id": "NP_001309321.2",
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"feature": null
},
{
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"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
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"exon_count": 15,
"intron_rank": null,
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"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322390.2",
"protein_id": "NP_001309319.2",
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"aa_start": null,
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"aa_length": 450,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322391.2",
"protein_id": "NP_001309320.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 450,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322389.2",
"protein_id": "NP_001309318.2",
"transcript_support_level": null,
"aa_start": null,
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"feature": null
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
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"exon_count": 14,
"intron_rank": null,
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"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*503A>G",
"hgvs_p": null,
"transcript": "NM_001322388.2",
"protein_id": "NP_001309317.2",
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"feature": null
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
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"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*503A>G",
"hgvs_p": null,
"transcript": "ENST00000433259.6",
"protein_id": "ENSP00000401895.2",
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"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322387.2",
"protein_id": "NP_001309316.2",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 436,
"cds_start": -4,
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"cds_length": 1311,
"cdna_start": null,
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"cdna_length": 3960,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "ENTPD6",
"gene_hgnc_id": 3368,
"hgvs_c": "c.*421A>G",
"hgvs_p": null,
"transcript": "NM_001322386.2",
"protein_id": "NP_001309315.2",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 433,
"cds_start": -4,
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"cdna_start": null,
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"cdna_length": 3933,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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