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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 20-43715181-C-G (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=20&pos=43715181&ref=C&alt=G&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "20",
      "pos": 43715181,
      "ref": "C",
      "alt": "G",
      "effect": "missense_variant",
      "transcript": "NM_002466.4",
      "consequences": [
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1872C>G",
          "hgvs_p": "p.Ile624Met",
          "transcript": "NM_002466.4",
          "protein_id": "NP_002457.1",
          "transcript_support_level": null,
          "aa_start": 624,
          "aa_end": null,
          "aa_length": 700,
          "cds_start": 1872,
          "cds_end": null,
          "cds_length": 2103,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000217026.5",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_002466.4"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1872C>G",
          "hgvs_p": "p.Ile624Met",
          "transcript": "ENST00000217026.5",
          "protein_id": "ENSP00000217026.4",
          "transcript_support_level": 1,
          "aa_start": 624,
          "aa_end": null,
          "aa_length": 700,
          "cds_start": 1872,
          "cds_end": null,
          "cds_length": 2103,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_002466.4",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000217026.5"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1998C>G",
          "hgvs_p": "p.Ile666Met",
          "transcript": "ENST00000913824.1",
          "protein_id": "ENSP00000583883.1",
          "transcript_support_level": null,
          "aa_start": 666,
          "aa_end": null,
          "aa_length": 742,
          "cds_start": 1998,
          "cds_end": null,
          "cds_length": 2229,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913824.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1956C>G",
          "hgvs_p": "p.Ile652Met",
          "transcript": "ENST00000913820.1",
          "protein_id": "ENSP00000583879.1",
          "transcript_support_level": null,
          "aa_start": 652,
          "aa_end": null,
          "aa_length": 728,
          "cds_start": 1956,
          "cds_end": null,
          "cds_length": 2187,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913820.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1920C>G",
          "hgvs_p": "p.Ile640Met",
          "transcript": "ENST00000913832.1",
          "protein_id": "ENSP00000583891.1",
          "transcript_support_level": null,
          "aa_start": 640,
          "aa_end": null,
          "aa_length": 716,
          "cds_start": 1920,
          "cds_end": null,
          "cds_length": 2151,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913832.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1908C>G",
          "hgvs_p": "p.Ile636Met",
          "transcript": "ENST00000913817.1",
          "protein_id": "ENSP00000583876.1",
          "transcript_support_level": null,
          "aa_start": 636,
          "aa_end": null,
          "aa_length": 712,
          "cds_start": 1908,
          "cds_end": null,
          "cds_length": 2139,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913817.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1896C>G",
          "hgvs_p": "p.Ile632Met",
          "transcript": "ENST00000913819.1",
          "protein_id": "ENSP00000583878.1",
          "transcript_support_level": null,
          "aa_start": 632,
          "aa_end": null,
          "aa_length": 708,
          "cds_start": 1896,
          "cds_end": null,
          "cds_length": 2127,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913819.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1893C>G",
          "hgvs_p": "p.Ile631Met",
          "transcript": "ENST00000913818.1",
          "protein_id": "ENSP00000583877.1",
          "transcript_support_level": null,
          "aa_start": 631,
          "aa_end": null,
          "aa_length": 707,
          "cds_start": 1893,
          "cds_end": null,
          "cds_length": 2124,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913818.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1881C>G",
          "hgvs_p": "p.Ile627Met",
          "transcript": "ENST00000913823.1",
          "protein_id": "ENSP00000583882.1",
          "transcript_support_level": null,
          "aa_start": 627,
          "aa_end": null,
          "aa_length": 703,
          "cds_start": 1881,
          "cds_end": null,
          "cds_length": 2112,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913823.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1866C>G",
          "hgvs_p": "p.Ile622Met",
          "transcript": "ENST00000913821.1",
          "protein_id": "ENSP00000583880.1",
          "transcript_support_level": null,
          "aa_start": 622,
          "aa_end": null,
          "aa_length": 698,
          "cds_start": 1866,
          "cds_end": null,
          "cds_length": 2097,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913821.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1845C>G",
          "hgvs_p": "p.Ile615Met",
          "transcript": "ENST00000913822.1",
          "protein_id": "ENSP00000583881.1",
          "transcript_support_level": null,
          "aa_start": 615,
          "aa_end": null,
          "aa_length": 691,
          "cds_start": 1845,
          "cds_end": null,
          "cds_length": 2076,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913822.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1836C>G",
          "hgvs_p": "p.Ile612Met",
          "transcript": "ENST00000913835.1",
          "protein_id": "ENSP00000583894.1",
          "transcript_support_level": null,
          "aa_start": 612,
          "aa_end": null,
          "aa_length": 688,
          "cds_start": 1836,
          "cds_end": null,
          "cds_length": 2067,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913835.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1827C>G",
          "hgvs_p": "p.Ile609Met",
          "transcript": "ENST00000913828.1",
          "protein_id": "ENSP00000583887.1",
          "transcript_support_level": null,
          "aa_start": 609,
          "aa_end": null,
          "aa_length": 685,
          "cds_start": 1827,
          "cds_end": null,
          "cds_length": 2058,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913828.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1800C>G",
          "hgvs_p": "p.Ile600Met",
          "transcript": "NM_001278610.2",
          "protein_id": "NP_001265539.1",
          "transcript_support_level": null,
          "aa_start": 600,
          "aa_end": null,
          "aa_length": 676,
          "cds_start": 1800,
          "cds_end": null,
          "cds_length": 2031,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "NM_001278610.2"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
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          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1800C>G",
          "hgvs_p": "p.Ile600Met",
          "transcript": "ENST00000396863.8",
          "protein_id": "ENSP00000380072.4",
          "transcript_support_level": 2,
          "aa_start": 600,
          "aa_end": null,
          "aa_length": 676,
          "cds_start": 1800,
          "cds_end": null,
          "cds_length": 2031,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000396863.8"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1779C>G",
          "hgvs_p": "p.Ile593Met",
          "transcript": "ENST00000913830.1",
          "protein_id": "ENSP00000583889.1",
          "transcript_support_level": null,
          "aa_start": 593,
          "aa_end": null,
          "aa_length": 669,
          "cds_start": 1779,
          "cds_end": null,
          "cds_length": 2010,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913830.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1743C>G",
          "hgvs_p": "p.Ile581Met",
          "transcript": "ENST00000913815.1",
          "protein_id": "ENSP00000583874.1",
          "transcript_support_level": null,
          "aa_start": 581,
          "aa_end": null,
          "aa_length": 657,
          "cds_start": 1743,
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          "cds_length": 1974,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
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        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
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          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 12,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1728C>G",
          "hgvs_p": "p.Ile576Met",
          "transcript": "ENST00000913836.1",
          "protein_id": "ENSP00000583895.1",
          "transcript_support_level": null,
          "aa_start": 576,
          "aa_end": null,
          "aa_length": 652,
          "cds_start": 1728,
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          "cds_length": 1959,
          "cdna_start": null,
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          "biotype": "protein_coding",
          "feature": "ENST00000913836.1"
        },
        {
          "aa_ref": "I",
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          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
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          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1728C>G",
          "hgvs_p": "p.Ile576Met",
          "transcript": "ENST00000913837.1",
          "protein_id": "ENSP00000583896.1",
          "transcript_support_level": null,
          "aa_start": 576,
          "aa_end": null,
          "aa_length": 652,
          "cds_start": 1728,
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          "cds_length": 1959,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913837.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 11,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "MYBL2",
          "gene_hgnc_id": 7548,
          "hgvs_c": "c.1707C>G",
          "hgvs_p": "p.Ile569Met",
          "transcript": "ENST00000913813.1",
          "protein_id": "ENSP00000583872.1",
          "transcript_support_level": null,
          "aa_start": 569,
          "aa_end": null,
          "aa_length": 645,
          "cds_start": 1707,
          "cds_end": null,
          "cds_length": 1938,
          "cdna_start": null,
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  "message": null
}