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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 20-45416168-T-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=20&pos=45416168&ref=T&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "20",
"pos": 45416168,
"ref": "T",
"alt": "A",
"effect": "synonymous_variant",
"transcript": "NM_015937.6",
"consequences": [
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "NM_015937.6",
"protein_id": "NP_057021.2",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 578,
"cds_start": 12,
"cds_end": null,
"cds_length": 1737,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000279036.12",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_015937.6"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000279036.12",
"protein_id": "ENSP00000279036.6",
"transcript_support_level": 1,
"aa_start": 4,
"aa_end": null,
"aa_length": 578,
"cds_start": 12,
"cds_end": null,
"cds_length": 1737,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_015937.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000279036.12"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000372689.9",
"protein_id": "ENSP00000361774.4",
"transcript_support_level": 1,
"aa_start": 4,
"aa_end": null,
"aa_length": 511,
"cds_start": 12,
"cds_end": null,
"cds_length": 1536,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000372689.9"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000639382.1",
"protein_id": "ENSP00000491534.1",
"transcript_support_level": 1,
"aa_start": 4,
"aa_end": null,
"aa_length": 392,
"cds_start": 12,
"cds_end": null,
"cds_length": 1180,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000639382.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000638353.1",
"protein_id": "ENSP00000491538.1",
"transcript_support_level": 1,
"aa_start": 4,
"aa_end": null,
"aa_length": 317,
"cds_start": 12,
"cds_end": null,
"cds_length": 955,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000638353.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000639235.1",
"protein_id": "ENSP00000492498.1",
"transcript_support_level": 1,
"aa_start": 4,
"aa_end": null,
"aa_length": 315,
"cds_start": 12,
"cds_end": null,
"cds_length": 949,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000639235.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000638489.1",
"protein_id": "ENSP00000491566.1",
"transcript_support_level": 1,
"aa_start": 4,
"aa_end": null,
"aa_length": 313,
"cds_start": 12,
"cds_end": null,
"cds_length": 942,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000638489.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000639292.2",
"protein_id": "ENSP00000491678.2",
"transcript_support_level": 5,
"aa_start": 4,
"aa_end": null,
"aa_length": 605,
"cds_start": 12,
"cds_end": null,
"cds_length": 1818,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000639292.2"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000854445.1",
"protein_id": "ENSP00000524504.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 575,
"cds_start": 12,
"cds_end": null,
"cds_length": 1728,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000854445.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000956767.1",
"protein_id": "ENSP00000626826.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 572,
"cds_start": 12,
"cds_end": null,
"cds_length": 1719,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000956767.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000854442.1",
"protein_id": "ENSP00000524501.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 569,
"cds_start": 12,
"cds_end": null,
"cds_length": 1710,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000854442.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000956771.1",
"protein_id": "ENSP00000626830.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 562,
"cds_start": 12,
"cds_end": null,
"cds_length": 1689,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000956771.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000638691.2",
"protein_id": "ENSP00000492094.2",
"transcript_support_level": 3,
"aa_start": 4,
"aa_end": null,
"aa_length": 550,
"cds_start": 12,
"cds_end": null,
"cds_length": 1653,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000638691.2"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000956773.1",
"protein_id": "ENSP00000626832.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 550,
"cds_start": 12,
"cds_end": null,
"cds_length": 1653,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000956773.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000956775.1",
"protein_id": "ENSP00000626834.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 538,
"cds_start": 12,
"cds_end": null,
"cds_length": 1617,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000956775.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000911912.1",
"protein_id": "ENSP00000581971.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 529,
"cds_start": 12,
"cds_end": null,
"cds_length": 1590,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911912.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "NM_001184728.3",
"protein_id": "NP_001171657.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 522,
"cds_start": 12,
"cds_end": null,
"cds_length": 1569,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001184728.3"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000543458.7",
"protein_id": "ENSP00000441577.1",
"transcript_support_level": 2,
"aa_start": 4,
"aa_end": null,
"aa_length": 522,
"cds_start": 12,
"cds_end": null,
"cds_length": 1569,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000543458.7"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000956774.1",
"protein_id": "ENSP00000626833.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 516,
"cds_start": 12,
"cds_end": null,
"cds_length": 1551,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000956774.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "NM_001184729.3",
"protein_id": "NP_001171658.1",
"transcript_support_level": null,
"aa_start": 4,
"aa_end": null,
"aa_length": 511,
"cds_start": 12,
"cds_end": null,
"cds_length": 1536,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001184729.3"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000638594.1",
"protein_id": "ENSP00000491697.1",
"transcript_support_level": 5,
"aa_start": 4,
"aa_end": null,
"aa_length": 505,
"cds_start": 12,
"cds_end": null,
"cds_length": 1518,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000638594.1"
},
{
"aa_ref": "A",
"aa_alt": "A",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"synonymous_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PIGT",
"gene_hgnc_id": 14938,
"hgvs_c": "c.12T>A",
"hgvs_p": "p.Ala4Ala",
"transcript": "ENST00000639499.1",
"protein_id": "ENSP00000491170.1",
"transcript_support_level": 5,
"aa_start": 4,
"aa_end": null,
"aa_length": 495,
"cds_start": 12,
"cds_end": null,
"cds_length": 1488,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000639499.1"
},
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}
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}