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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 20-47225746-T-A (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=20&pos=47225746&ref=T&alt=A&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "20",
      "pos": 47225746,
      "ref": "T",
      "alt": "A",
      "effect": "intron_variant",
      "transcript": "NM_001363714.1",
      "consequences": [
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 23,
          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.3017-1190A>T",
          "hgvs_p": null,
          "transcript": "NM_001281775.3",
          "protein_id": "NP_001268704.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1234,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3705,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000471951.7",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001281775.3"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 23,
          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.3017-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000471951.7",
          "protein_id": "ENSP00000420095.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1234,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3705,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_001281775.3",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000471951.7"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 23,
          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2957-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000446994.6",
          "protein_id": "ENSP00000396725.3",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1214,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3645,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000446994.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 23,
          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2879-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000461685.5",
          "protein_id": "ENSP00000418210.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1188,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3567,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000461685.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 22,
          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2957-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000311275.11",
          "protein_id": "ENSP00000312237.7",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1186,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3561,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000311275.11"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 24,
          "intron_rank": 19,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2819-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000262975.8",
          "protein_id": "ENSP00000262975.4",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1168,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3507,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000262975.8"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 22,
          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2879-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000352431.6",
          "protein_id": "ENSP00000335537.3",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1160,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3483,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000352431.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 22,
          "intron_rank": 17,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2723-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000617418.4",
          "protein_id": "ENSP00000479806.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1136,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3411,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000617418.4"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 22,
          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2804-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000360911.7",
          "protein_id": "ENSP00000354166.3",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1135,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 3408,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000360911.7"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 21,
          "intron_rank": 17,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2801-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000540497.5",
          "protein_id": "ENSP00000443086.3",
          "transcript_support_level": 1,
          "aa_start": null,
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          "aa_length": 1134,
          "cds_start": null,
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          "cdna_start": null,
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          "biotype": "protein_coding",
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        },
        {
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          "canonical": false,
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          "consequences": [
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          "exon_count": 20,
          "intron_rank": 15,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.2597-1190A>T",
          "hgvs_p": null,
          "transcript": "ENST00000467200.6",
          "protein_id": "ENSP00000418495.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 1094,
          "cds_start": null,
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          "cdna_start": null,
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          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
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        },
        {
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          "strand": false,
          "consequences": [
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          "intron_rank": 17,
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          "gene_symbol": "ZMYND8",
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          "protein_id": "ENSP00000482048.1",
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          "cds_start": null,
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        {
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          "intron_rank": 17,
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          "gene_symbol": "ZMYND8",
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          "transcript": "ENST00000458360.6",
          "protein_id": "ENSP00000392964.2",
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        {
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          "intron_rank": 18,
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          "gene_symbol": "ZMYND8",
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          "hgvs_c": "c.3017-1190A>T",
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          "transcript": "ENST00000962293.1",
          "protein_id": "ENSP00000632352.1",
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        {
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          "gene_symbol": "ZMYND8",
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          "protein_id": "ENSP00000439800.1",
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          "gene_symbol": "ZMYND8",
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          "transcript": "NM_001281773.3",
          "protein_id": "NP_001268702.1",
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        {
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        {
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          "intron_rank": 18,
          "intron_rank_end": null,
          "gene_symbol": "ZMYND8",
          "gene_hgnc_id": 9397,
          "hgvs_c": "c.3017-1190A>T",
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          "transcript": "NM_001281783.3",
          "protein_id": "NP_001268712.1",
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        {
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For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.