← Back to variant description

GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 21-36937319-C-A (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=21&pos=36937319&ref=C&alt=A&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "21",
      "pos": 36937319,
      "ref": "C",
      "alt": "A",
      "effect": "missense_variant",
      "transcript": "ENST00000674895.3",
      "consequences": [
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.567G>T",
          "hgvs_p": "p.Glu189Asp",
          "transcript": "NM_001352514.2",
          "protein_id": "NP_001339443.1",
          "transcript_support_level": null,
          "aa_start": 189,
          "aa_end": null,
          "aa_length": 873,
          "cds_start": 567,
          "cds_end": null,
          "cds_length": 2622,
          "cdna_start": 598,
          "cdna_end": null,
          "cdna_length": 8273,
          "mane_select": "ENST00000674895.3",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.567G>T",
          "hgvs_p": "p.Glu189Asp",
          "transcript": "ENST00000674895.3",
          "protein_id": "ENSP00000502087.2",
          "transcript_support_level": null,
          "aa_start": 189,
          "aa_end": null,
          "aa_length": 873,
          "cds_start": 567,
          "cds_end": null,
          "cds_length": 2622,
          "cdna_start": 598,
          "cdna_end": null,
          "cdna_length": 8273,
          "mane_select": "NM_001352514.2",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "ENST00000336648.8",
          "protein_id": "ENSP00000338387.3",
          "transcript_support_level": 1,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 597,
          "cdna_end": null,
          "cdna_length": 6010,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "ENST00000399120.5",
          "protein_id": "ENSP00000382071.1",
          "transcript_support_level": 1,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 1357,
          "cdna_end": null,
          "cdna_length": 6466,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "ENST00000448340.5",
          "protein_id": "ENSP00000392923.1",
          "transcript_support_level": 1,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 91,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 277,
          "cdna_start": 629,
          "cdna_end": null,
          "cdna_length": 780,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "NM_000411.8",
          "protein_id": "NP_000402.3",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 572,
          "cdna_end": null,
          "cdna_length": 8247,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "NM_001242784.3",
          "protein_id": "NP_001229713.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 1553,
          "cdna_end": null,
          "cdna_length": 9228,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "NM_001242785.2",
          "protein_id": "NP_001229714.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 729,
          "cdna_end": null,
          "cdna_length": 8405,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "NM_001352515.2",
          "protein_id": "NP_001339444.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 426,
          "cdna_end": null,
          "cdna_length": 8101,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "NM_001352516.2",
          "protein_id": "NP_001339445.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 629,
          "cdna_end": null,
          "cdna_length": 8304,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "NM_001352517.1",
          "protein_id": "NP_001339446.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 583,
          "cdna_end": null,
          "cdna_length": 8259,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "NM_001352518.2",
          "protein_id": "NP_001339447.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 442,
          "cdna_end": null,
          "cdna_length": 8117,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "ENST00000612277.4",
          "protein_id": "ENSP00000479939.1",
          "transcript_support_level": 5,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 699,
          "cdna_end": null,
          "cdna_length": 6112,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "ENST00000675307.1",
          "protein_id": "ENSP00000501750.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 521,
          "cdna_end": null,
          "cdna_length": 4757,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "ENST00000427746.1",
          "protein_id": "ENSP00000396443.1",
          "transcript_support_level": 3,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 76,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 231,
          "cdna_start": 561,
          "cdna_end": null,
          "cdna_length": 666,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.411G>T",
          "hgvs_p": "p.Glu137Asp",
          "transcript": "XM_047440752.1",
          "protein_id": "XP_047296708.1",
          "transcript_support_level": null,
          "aa_start": 137,
          "aa_end": null,
          "aa_length": 821,
          "cds_start": 411,
          "cds_end": null,
          "cds_length": 2466,
          "cdna_start": 3899,
          "cdna_end": null,
          "cdna_length": 11575,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.567G>T",
          "hgvs_p": "p.Glu189Asp",
          "transcript": "XM_047440753.1",
          "protein_id": "XP_047296709.1",
          "transcript_support_level": null,
          "aa_start": 189,
          "aa_end": null,
          "aa_length": 751,
          "cds_start": 567,
          "cds_end": null,
          "cds_length": 2256,
          "cdna_start": 598,
          "cdna_end": null,
          "cdna_length": 2527,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "XM_047440754.1",
          "protein_id": "XP_047296710.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 726,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 2181,
          "cdna_start": 257,
          "cdna_end": null,
          "cdna_length": 7933,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.567G>T",
          "hgvs_p": "p.Glu189Asp",
          "transcript": "XM_011529540.3",
          "protein_id": "XP_011527842.1",
          "transcript_support_level": null,
          "aa_start": 189,
          "aa_end": null,
          "aa_length": 636,
          "cds_start": 567,
          "cds_end": null,
          "cds_length": 1911,
          "cdna_start": 598,
          "cdna_end": null,
          "cdna_length": 5245,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.567G>T",
          "hgvs_p": "p.Glu189Asp",
          "transcript": "XM_047440755.1",
          "protein_id": "XP_047296711.1",
          "transcript_support_level": null,
          "aa_start": 189,
          "aa_end": null,
          "aa_length": 550,
          "cds_start": 567,
          "cds_end": null,
          "cds_length": 1653,
          "cdna_start": 598,
          "cdna_end": null,
          "cdna_length": 1783,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "E",
          "aa_alt": "D",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.126G>T",
          "hgvs_p": "p.Glu42Asp",
          "transcript": "XM_047440756.1",
          "protein_id": "XP_047296712.1",
          "transcript_support_level": null,
          "aa_start": 42,
          "aa_end": null,
          "aa_length": 489,
          "cds_start": 126,
          "cds_end": null,
          "cds_length": 1470,
          "cdna_start": 426,
          "cdna_end": null,
          "cdna_length": 5073,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "n.126G>T",
          "hgvs_p": null,
          "transcript": "ENST00000675057.1",
          "protein_id": "ENSP00000501832.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4903,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "n.426G>T",
          "hgvs_p": null,
          "transcript": "NR_148020.2",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 8326,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "n.583G>T",
          "hgvs_p": null,
          "transcript": "NR_148021.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 8484,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "5_prime_UTR_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "HLCS",
          "gene_hgnc_id": 4976,
          "hgvs_c": "c.-46G>T",
          "hgvs_p": null,
          "transcript": "XM_024452065.2",
          "protein_id": "XP_024307833.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 669,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 2010,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 7939,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "HLCS",
      "gene_hgnc_id": 4976,
      "dbsnp": "rs61732504",
      "frequency_reference_population": 0.014148506,
      "hom_count_reference_population": 637,
      "allele_count_reference_population": 22836,
      "gnomad_exomes_af": 0.0115802,
      "gnomad_genomes_af": 0.0388128,
      "gnomad_exomes_ac": 16928,
      "gnomad_genomes_ac": 5908,
      "gnomad_exomes_homalt": 392,
      "gnomad_genomes_homalt": 245,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.0016950368881225586,
      "computational_prediction_selected": "Benign",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.189,
      "revel_prediction": "Benign",
      "alphamissense_score": 0.0932,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.3,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": -0.453,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -20,
      "acmg_classification": "Benign",
      "acmg_criteria": "BP4_Strong,BP6_Very_Strong,BA1",
      "acmg_by_gene": [
        {
          "score": -20,
          "benign_score": 20,
          "pathogenic_score": 0,
          "criteria": [
            "BP4_Strong",
            "BP6_Very_Strong",
            "BA1"
          ],
          "verdict": "Benign",
          "transcript": "ENST00000674895.3",
          "gene_symbol": "HLCS",
          "hgnc_id": 4976,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.567G>T",
          "hgvs_p": "p.Glu189Asp"
        }
      ],
      "clinvar_disease": "Holocarboxylase synthetase deficiency,not provided,not specified",
      "clinvar_classification": "Benign/Likely benign",
      "clinvar_review_status": "criteria provided, multiple submitters, no conflicts",
      "clinvar_submissions_summary": "LB:2 B:4",
      "phenotype_combined": "not specified|Holocarboxylase synthetase deficiency|not provided",
      "pathogenicity_classification_combined": "Benign/Likely benign",
      "custom_annotations": null
    }
  ],
  "message": null
}