← Back to variant description
GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 22-18922842-G-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=22&pos=18922842&ref=G&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "22",
"pos": 18922842,
"ref": "G",
"alt": "A",
"effect": "missense_variant",
"transcript": "NM_016335.6",
"consequences": [
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.824C>T",
"hgvs_p": "p.Thr275Ile",
"transcript": "NM_016335.6",
"protein_id": "NP_057419.5",
"transcript_support_level": null,
"aa_start": 275,
"aa_end": null,
"aa_length": 600,
"cds_start": 824,
"cds_end": null,
"cds_length": 1803,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000357068.11",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_016335.6"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.824C>T",
"hgvs_p": "p.Thr275Ile",
"transcript": "ENST00000357068.11",
"protein_id": "ENSP00000349577.6",
"transcript_support_level": 1,
"aa_start": 275,
"aa_end": null,
"aa_length": 600,
"cds_start": 824,
"cds_end": null,
"cds_length": 1803,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_016335.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000357068.11"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.824C>T",
"hgvs_p": "p.Thr275Ile",
"transcript": "ENST00000610940.4",
"protein_id": "ENSP00000480347.1",
"transcript_support_level": 1,
"aa_start": 275,
"aa_end": null,
"aa_length": 600,
"cds_start": 824,
"cds_end": null,
"cds_length": 1803,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000610940.4"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.500C>T",
"hgvs_p": "p.Thr167Ile",
"transcript": "ENST00000334029.6",
"protein_id": "ENSP00000334726.2",
"transcript_support_level": 1,
"aa_start": 167,
"aa_end": null,
"aa_length": 492,
"cds_start": 500,
"cds_end": null,
"cds_length": 1479,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000334029.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "ENSG00000283809",
"gene_hgnc_id": null,
"hgvs_c": "c.513+11814G>A",
"hgvs_p": null,
"transcript": "ENST00000638240.1",
"protein_id": "ENSP00000492446.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 180,
"cds_start": null,
"cds_end": null,
"cds_length": 543,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000638240.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "n.860C>T",
"hgvs_p": null,
"transcript": "ENST00000482858.5",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000482858.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "n.832C>T",
"hgvs_p": null,
"transcript": "ENST00000491604.5",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000491604.5"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.989C>T",
"hgvs_p": "p.Thr330Ile",
"transcript": "ENST00000916124.1",
"protein_id": "ENSP00000586183.1",
"transcript_support_level": null,
"aa_start": 330,
"aa_end": null,
"aa_length": 655,
"cds_start": 989,
"cds_end": null,
"cds_length": 1968,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916124.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.824C>T",
"hgvs_p": "p.Thr275Ile",
"transcript": "ENST00000881003.1",
"protein_id": "ENSP00000551062.1",
"transcript_support_level": null,
"aa_start": 275,
"aa_end": null,
"aa_length": 607,
"cds_start": 824,
"cds_end": null,
"cds_length": 1824,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881003.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.818C>T",
"hgvs_p": "p.Thr273Ile",
"transcript": "ENST00000881004.1",
"protein_id": "ENSP00000551063.1",
"transcript_support_level": null,
"aa_start": 273,
"aa_end": null,
"aa_length": 605,
"cds_start": 818,
"cds_end": null,
"cds_length": 1818,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881004.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.818C>T",
"hgvs_p": "p.Thr273Ile",
"transcript": "ENST00000881005.1",
"protein_id": "ENSP00000551064.1",
"transcript_support_level": null,
"aa_start": 273,
"aa_end": null,
"aa_length": 598,
"cds_start": 818,
"cds_end": null,
"cds_length": 1797,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881005.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.773C>T",
"hgvs_p": "p.Thr258Ile",
"transcript": "ENST00000881001.1",
"protein_id": "ENSP00000551060.1",
"transcript_support_level": null,
"aa_start": 258,
"aa_end": null,
"aa_length": 583,
"cds_start": 773,
"cds_end": null,
"cds_length": 1752,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881001.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.824C>T",
"hgvs_p": "p.Thr275Ile",
"transcript": "ENST00000965629.1",
"protein_id": "ENSP00000635688.1",
"transcript_support_level": null,
"aa_start": 275,
"aa_end": null,
"aa_length": 551,
"cds_start": 824,
"cds_end": null,
"cds_length": 1656,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965629.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.824C>T",
"hgvs_p": "p.Thr275Ile",
"transcript": "ENST00000916125.1",
"protein_id": "ENSP00000586184.1",
"transcript_support_level": null,
"aa_start": 275,
"aa_end": null,
"aa_length": 546,
"cds_start": 824,
"cds_end": null,
"cds_length": 1641,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916125.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.500C>T",
"hgvs_p": "p.Thr167Ile",
"transcript": "NM_001195226.2",
"protein_id": "NP_001182155.2",
"transcript_support_level": null,
"aa_start": 167,
"aa_end": null,
"aa_length": 492,
"cds_start": 500,
"cds_end": null,
"cds_length": 1479,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001195226.2"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.500C>T",
"hgvs_p": "p.Thr167Ile",
"transcript": "NM_001368250.2",
"protein_id": "NP_001355179.2",
"transcript_support_level": null,
"aa_start": 167,
"aa_end": null,
"aa_length": 492,
"cds_start": 500,
"cds_end": null,
"cds_length": 1479,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001368250.2"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.500C>T",
"hgvs_p": "p.Thr167Ile",
"transcript": "ENST00000420436.5",
"protein_id": "ENSP00000410805.1",
"transcript_support_level": 2,
"aa_start": 167,
"aa_end": null,
"aa_length": 492,
"cds_start": 500,
"cds_end": null,
"cds_length": 1479,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000420436.5"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.389C>T",
"hgvs_p": "p.Thr130Ile",
"transcript": "ENST00000965628.1",
"protein_id": "ENSP00000635687.1",
"transcript_support_level": null,
"aa_start": 130,
"aa_end": null,
"aa_length": 455,
"cds_start": 389,
"cds_end": null,
"cds_length": 1368,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965628.1"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.404C>T",
"hgvs_p": "p.Thr135Ile",
"transcript": "ENST00000438924.5",
"protein_id": "ENSP00000409742.1",
"transcript_support_level": 3,
"aa_start": 135,
"aa_end": null,
"aa_length": 183,
"cds_start": 404,
"cds_end": null,
"cds_length": 552,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000438924.5"
},
{
"aa_ref": "T",
"aa_alt": "I",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.347C>T",
"hgvs_p": "p.Thr116Ile",
"transcript": "ENST00000450579.1",
"protein_id": "ENSP00000396806.1",
"transcript_support_level": 3,
"aa_start": 116,
"aa_end": null,
"aa_length": 134,
"cds_start": 347,
"cds_end": null,
"cds_length": 405,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000450579.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.732+273C>T",
"hgvs_p": null,
"transcript": "ENST00000881002.1",
"protein_id": "ENSP00000551061.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 561,
"cds_start": null,
"cds_end": null,
"cds_length": 1686,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000881002.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.667+2209C>T",
"hgvs_p": null,
"transcript": "ENST00000916126.1",
"protein_id": "ENSP00000586185.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 484,
"cds_start": null,
"cds_end": null,
"cds_length": 1455,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000916126.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.303+2209C>T",
"hgvs_p": null,
"transcript": "ENST00000965627.1",
"protein_id": "ENSP00000635686.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 364,
"cds_start": null,
"cds_end": null,
"cds_length": 1095,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000965627.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "n.288C>T",
"hgvs_p": null,
"transcript": "ENST00000399694.1",
"protein_id": null,
"transcript_support_level": 3,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000399694.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 1,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "n.1161C>T",
"hgvs_p": null,
"transcript": "ENST00000429300.5",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000429300.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"downstream_gene_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"hgvs_c": "c.*38C>T",
"hgvs_p": null,
"transcript": "ENST00000457083.1",
"protein_id": "ENSP00000413941.1",
"transcript_support_level": 3,
"aa_start": null,
"aa_end": null,
"aa_length": 162,
"cds_start": null,
"cds_end": null,
"cds_length": 489,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000457083.1"
}
],
"gene_symbol": "PRODH",
"gene_hgnc_id": 9453,
"dbsnp": "rs5747933",
"frequency_reference_population": null,
"hom_count_reference_population": 0,
"allele_count_reference_population": 0,
"gnomad_exomes_af": null,
"gnomad_genomes_af": null,
"gnomad_exomes_ac": null,
"gnomad_genomes_ac": null,
"gnomad_exomes_homalt": null,
"gnomad_genomes_homalt": null,
"gnomad_mito_homoplasmic": null,
"gnomad_mito_heteroplasmic": null,
"computational_score_selected": 0.08710631728172302,
"computational_prediction_selected": "Benign",
"computational_source_selected": "MetaRNN",
"splice_score_selected": 0,
"splice_prediction_selected": "Benign",
"splice_source_selected": "max_spliceai",
"revel_score": 0.034,
"revel_prediction": "Benign",
"alphamissense_score": 0.1498,
"alphamissense_prediction": null,
"bayesdelnoaf_score": -0.46,
"bayesdelnoaf_prediction": "Benign",
"phylop100way_score": 0,
"phylop100way_prediction": "Benign",
"spliceai_max_score": 0,
"spliceai_max_prediction": "Benign",
"dbscsnv_ada_score": null,
"dbscsnv_ada_prediction": null,
"apogee2_score": null,
"apogee2_prediction": null,
"mitotip_score": null,
"mitotip_prediction": null,
"acmg_score": -2,
"acmg_classification": "Likely_benign",
"acmg_criteria": "BP4_Moderate",
"acmg_by_gene": [
{
"score": -2,
"benign_score": 2,
"pathogenic_score": 0,
"criteria": [
"BP4_Moderate"
],
"verdict": "Likely_benign",
"transcript": "NM_016335.6",
"gene_symbol": "PRODH",
"hgnc_id": 9453,
"effects": [
"missense_variant"
],
"inheritance_mode": "AR",
"hgvs_c": "c.824C>T",
"hgvs_p": "p.Thr275Ile"
},
{
"score": -2,
"benign_score": 2,
"pathogenic_score": 0,
"criteria": [
"BP4_Moderate"
],
"verdict": "Likely_benign",
"transcript": "ENST00000638240.1",
"gene_symbol": "ENSG00000283809",
"hgnc_id": null,
"effects": [
"intron_variant"
],
"inheritance_mode": "",
"hgvs_c": "c.513+11814G>A",
"hgvs_p": null
}
],
"clinvar_disease": "",
"clinvar_classification": "",
"clinvar_review_status": "",
"clinvar_submissions_summary": "",
"phenotype_combined": null,
"pathogenicity_classification_combined": null,
"custom_annotations": null
}
],
"message": null
}