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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 22-24439072-CTTTT-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=22&pos=24439072&ref=CTTTT&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "22",
"pos": 24439072,
"ref": "CTTTT",
"alt": "C",
"effect": "intron_variant",
"transcript": "NM_000675.6",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1485_333-1482delTTTT",
"hgvs_p": null,
"transcript": "NM_000675.6",
"protein_id": "NP_000666.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2529,
"mane_select": "ENST00000337539.12",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_000675.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000337539.12",
"protein_id": "ENSP00000336630.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2529,
"mane_select": "NM_000675.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000337539.12"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000618076.3",
"protein_id": "ENSP00000481552.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2630,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000618076.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 19,
"intron_rank_end": null,
"gene_symbol": "SPECC1L-ADORA2A",
"gene_hgnc_id": 49185,
"hgvs_c": "n.*1468-1510_*1468-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000358654.2",
"protein_id": "ENSP00000351480.2",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6204,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000358654.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ADORA2A-AS1",
"gene_hgnc_id": 37122,
"hgvs_c": "n.1544+218_1544+221delAAAA",
"hgvs_p": null,
"transcript": "ENST00000427813.6",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2027,
"mane_select": null,
"mane_plus": null,
"biotype": "pseudogene",
"feature": "ENST00000427813.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1485_333-1482delTTTT",
"hgvs_p": null,
"transcript": "NM_001278497.2",
"protein_id": "NP_001265426.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2608,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001278497.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1485_333-1482delTTTT",
"hgvs_p": null,
"transcript": "NM_001278498.2",
"protein_id": "NP_001265427.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2502,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001278498.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1485_333-1482delTTTT",
"hgvs_p": null,
"transcript": "NM_001278499.2",
"protein_id": "NP_001265428.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2509,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001278499.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1485_333-1482delTTTT",
"hgvs_p": null,
"transcript": "NM_001278500.2",
"protein_id": "NP_001265429.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2413,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001278500.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000610595.4",
"protein_id": "ENSP00000480012.1",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
"cds_end": null,
"cds_length": 1239,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2736,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000610595.4"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000611543.4",
"protein_id": "ENSP00000483102.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": 2412,
"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000611543.4"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880349.1",
"protein_id": "ENSP00000550408.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000880349.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 4,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880350.1",
"protein_id": "ENSP00000550409.1",
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
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},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"intron_rank_end": null,
"gene_symbol": "ADORA2A",
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"hgvs_c": "c.333-1510_333-1507delTTTT",
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"transcript": "ENST00000880351.1",
"protein_id": "ENSP00000550410.1",
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000880351.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 4,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880352.1",
"protein_id": "ENSP00000550411.1",
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"mane_select": null,
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"feature": "ENST00000880352.1"
},
{
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"strand": true,
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],
"exon_rank": null,
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"intron_rank": 3,
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"gene_symbol": "ADORA2A",
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"hgvs_c": "c.333-1510_333-1507delTTTT",
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"transcript": "ENST00000880353.1",
"protein_id": "ENSP00000550412.1",
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"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000880353.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880354.1",
"protein_id": "ENSP00000550413.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"cdna_length": 2509,
"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000880354.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880355.1",
"protein_id": "ENSP00000550414.1",
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"mane_select": null,
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 2,
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"gene_symbol": "ADORA2A",
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"hgvs_c": "c.333-1510_333-1507delTTTT",
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"transcript": "ENST00000880356.1",
"protein_id": "ENSP00000550415.1",
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"mane_select": null,
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"feature": "ENST00000880356.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 3,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880357.1",
"protein_id": "ENSP00000550416.1",
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"biotype": "protein_coding",
"feature": "ENST00000880357.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880358.1",
"protein_id": "ENSP00000550417.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": 2930,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000880358.1"
},
{
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"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": 3,
"intron_rank_end": null,
"gene_symbol": "ADORA2A",
"gene_hgnc_id": 263,
"hgvs_c": "c.333-1510_333-1507delTTTT",
"hgvs_p": null,
"transcript": "ENST00000880359.1",
"protein_id": "ENSP00000550418.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 412,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": 2703,
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