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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 22-31458860-T-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=22&pos=31458860&ref=T&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "22",
"pos": 31458860,
"ref": "T",
"alt": "G",
"effect": "intron_variant",
"transcript": "NM_019843.4",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "NM_019843.4",
"protein_id": "NP_062817.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 985,
"cds_start": null,
"cds_end": null,
"cds_length": 2958,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000330125.10",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_019843.4"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000330125.10",
"protein_id": "ENSP00000328103.5",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 985,
"cds_start": null,
"cds_end": null,
"cds_length": 2958,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_019843.4",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000330125.10"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000397525.5",
"protein_id": "ENSP00000380659.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 985,
"cds_start": null,
"cds_end": null,
"cds_length": 2958,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000397525.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.299-210A>C",
"hgvs_p": null,
"transcript": "ENST00000344710.9",
"protein_id": "ENSP00000342927.5",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 811,
"cds_start": null,
"cds_end": null,
"cds_length": 2436,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000344710.9"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000892292.1",
"protein_id": "ENSP00000562351.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 986,
"cds_start": null,
"cds_end": null,
"cds_length": 2961,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892292.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000927349.1",
"protein_id": "ENSP00000597408.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 986,
"cds_start": null,
"cds_end": null,
"cds_length": 2961,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000927349.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000972526.1",
"protein_id": "ENSP00000642585.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 986,
"cds_start": null,
"cds_end": null,
"cds_length": 2961,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000972526.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000972527.1",
"protein_id": "ENSP00000642586.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 986,
"cds_start": null,
"cds_end": null,
"cds_length": 2961,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000972527.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "NM_001164501.2",
"protein_id": "NP_001157973.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 985,
"cds_start": null,
"cds_end": null,
"cds_length": 2958,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001164501.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000892291.1",
"protein_id": "ENSP00000562350.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 985,
"cds_start": null,
"cds_end": null,
"cds_length": 2958,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892291.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000892293.1",
"protein_id": "ENSP00000562352.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 985,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892293.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000892299.1",
"protein_id": "ENSP00000562358.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 985,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000892299.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000892302.1",
"protein_id": "ENSP00000562361.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000892302.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 19,
"intron_rank": 6,
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"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
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"transcript": "ENST00000927347.1",
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000927347.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000927346.1",
"protein_id": "ENSP00000597405.1",
"transcript_support_level": null,
"aa_start": null,
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"mane_select": null,
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"feature": "ENST00000927346.1"
},
{
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"strand": false,
"consequences": [
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],
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"exon_count": 19,
"intron_rank": 6,
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"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
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"transcript": "ENST00000892296.1",
"protein_id": "ENSP00000562355.1",
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"cds_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000892296.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000892301.1",
"protein_id": "ENSP00000562360.1",
"transcript_support_level": null,
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000892301.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000927348.1",
"protein_id": "ENSP00000597407.1",
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000972530.1",
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"biotype": "protein_coding",
"feature": "ENST00000972530.1"
},
{
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"strand": false,
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],
"exon_rank": null,
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"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
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"hgvs_c": "c.788-210A>C",
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"transcript": "ENST00000892297.1",
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},
{
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"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 19,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000972529.1",
"protein_id": "ENSP00000642588.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000972529.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "EIF4ENIF1",
"gene_hgnc_id": 16687,
"hgvs_c": "c.788-210A>C",
"hgvs_p": null,
"transcript": "ENST00000892295.1",
"protein_id": "ENSP00000562354.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 962,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000892295.1"
},
{
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