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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 22-40363304-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=22&pos=40363304&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
  "variants": [
    {
      "chr": "22",
      "pos": 40363304,
      "ref": "A",
      "alt": "G",
      "effect": "intron_variant",
      "transcript": "ENST00000623063.3",
      "consequences": [
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": 10,
          "intron_rank_end": null,
          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1101+233A>G",
          "hgvs_p": null,
          "transcript": "NM_000026.4",
          "protein_id": "NP_000017.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 484,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1455,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4359,
          "mane_select": "ENST00000623063.3",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": 10,
          "intron_rank_end": null,
          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1101+233A>G",
          "hgvs_p": null,
          "transcript": "ENST00000623063.3",
          "protein_id": "ENSP00000485525.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 484,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1455,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4359,
          "mane_select": "NM_000026.4",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": 10,
          "intron_rank_end": null,
          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1101+233A>G",
          "hgvs_p": null,
          "transcript": "ENST00000342312.9",
          "protein_id": "ENSP00000341429.6",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 425,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1278,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1808,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": 10,
          "intron_rank_end": null,
          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "n.*495+233A>G",
          "hgvs_p": null,
          "transcript": "ENST00000480775.3",
          "protein_id": "ENSP00000485462.2",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 2135,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": true,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": 9,
          "intron_rank_end": null,
          "gene_symbol": "ENSG00000284431",
          "gene_hgnc_id": null,
          "hgvs_c": "n.*797+233A>G",
          "hgvs_p": null,
          "transcript": "ENST00000639722.1",
          "protein_id": "ENSP00000492828.1",
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4563,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": 10,
          "intron_rank_end": null,
          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1101+233A>G",
          "hgvs_p": null,
          "transcript": "NM_001410812.1",
          "protein_id": "NP_001397741.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 526,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1581,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3389,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": 10,
          "intron_rank_end": null,
          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1101+233A>G",
          "hgvs_p": null,
          "transcript": "ENST00000680978.1",
          "protein_id": "ENSP00000505244.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 526,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1581,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1859,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": 11,
          "intron_rank_end": null,
          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1188+233A>G",
          "hgvs_p": null,
          "transcript": "ENST00000680378.1",
          "protein_id": "ENSP00000505556.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 513,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": 1542,
          "cdna_start": null,
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          "cdna_length": 1989,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
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          "exon_count": 13,
          "intron_rank": 10,
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          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1143+233A>G",
          "hgvs_p": null,
          "transcript": "ENST00000216194.11",
          "protein_id": "ENSP00000216194.8",
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          "cds_start": -4,
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        {
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          "strand": true,
          "consequences": [
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          "gene_symbol": "ADSL",
          "gene_hgnc_id": 291,
          "hgvs_c": "c.1143+233A>G",
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          "transcript": "ENST00000625194.4",
          "protein_id": "ENSP00000485289.2",
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          "hgvs_c": "c.1101+233A>G",
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          "gene_symbol": "ADSL",
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          "hgvs_c": "c.1101+233A>G",
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          "gene_symbol": "ADSL",
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          "hgvs_c": "c.1101+233A>G",
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          "gene_symbol": "ADSL",
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          "hgvs_c": "c.793-972A>G",
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          "exon_count": 11,
          "intron_rank": 8,
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          "gene_symbol": "ADSL",
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          "hgvs_c": "n.*526+233A>G",
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      "clinvar_disease": "not provided",
      "clinvar_classification": "Benign",
      "clinvar_review_status": "criteria provided, multiple submitters, no conflicts",
      "clinvar_submissions_summary": "B:2",
      "phenotype_combined": "not provided",
      "pathogenicity_classification_combined": "Benign",
      "custom_annotations": null
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  "message": null
}