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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 3-195866930-G-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=3&pos=195866930&ref=G&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "3",
      "pos": 195866930,
      "ref": "G",
      "alt": "T",
      "effect": "synonymous_variant",
      "transcript": "NM_001387707.1",
      "consequences": [
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3120C>A",
          "hgvs_p": "p.Ala1040Ala",
          "transcript": "NM_001382273.1",
          "protein_id": "NP_001369202.1",
          "transcript_support_level": null,
          "aa_start": 1040,
          "aa_end": null,
          "aa_length": 1055,
          "cds_start": 3120,
          "cds_end": null,
          "cds_length": 3168,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000672887.2",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001382273.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3120C>A",
          "hgvs_p": "p.Ala1040Ala",
          "transcript": "ENST00000672887.2",
          "protein_id": "ENSP00000499899.1",
          "transcript_support_level": null,
          "aa_start": 1040,
          "aa_end": null,
          "aa_length": 1055,
          "cds_start": 3120,
          "cds_end": null,
          "cds_length": 3168,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_001382273.1",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000672887.2"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3075C>A",
          "hgvs_p": "p.Ala1025Ala",
          "transcript": "ENST00000428187.7",
          "protein_id": "ENSP00000392546.1",
          "transcript_support_level": 1,
          "aa_start": 1025,
          "aa_end": null,
          "aa_length": 1040,
          "cds_start": 3075,
          "cds_end": null,
          "cds_length": 3123,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000428187.7"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3069C>A",
          "hgvs_p": "p.Ala1023Ala",
          "transcript": "ENST00000333602.14",
          "protein_id": "ENSP00000329425.6",
          "transcript_support_level": 1,
          "aa_start": 1023,
          "aa_end": null,
          "aa_length": 1038,
          "cds_start": 3069,
          "cds_end": null,
          "cds_length": 3117,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000333602.14"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3216C>A",
          "hgvs_p": "p.Ala1072Ala",
          "transcript": "NM_001387707.1",
          "protein_id": "NP_001374636.1",
          "transcript_support_level": null,
          "aa_start": 1072,
          "aa_end": null,
          "aa_length": 1087,
          "cds_start": 3216,
          "cds_end": null,
          "cds_length": 3264,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001387707.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3213C>A",
          "hgvs_p": "p.Ala1071Ala",
          "transcript": "ENST00000381916.7",
          "protein_id": "ENSP00000371341.2",
          "transcript_support_level": 2,
          "aa_start": 1071,
          "aa_end": null,
          "aa_length": 1086,
          "cds_start": 3213,
          "cds_end": null,
          "cds_length": 3261,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000381916.7"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3192C>A",
          "hgvs_p": "p.Ala1064Ala",
          "transcript": "NM_001382272.1",
          "protein_id": "NP_001369201.1",
          "transcript_support_level": null,
          "aa_start": 1064,
          "aa_end": null,
          "aa_length": 1079,
          "cds_start": 3192,
          "cds_end": null,
          "cds_length": 3240,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001382272.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3189C>A",
          "hgvs_p": "p.Ala1063Ala",
          "transcript": "ENST00000863906.1",
          "protein_id": "ENSP00000533965.1",
          "transcript_support_level": null,
          "aa_start": 1063,
          "aa_end": null,
          "aa_length": 1078,
          "cds_start": 3189,
          "cds_end": null,
          "cds_length": 3237,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000863906.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3189C>A",
          "hgvs_p": "p.Ala1063Ala",
          "transcript": "ENST00000863912.1",
          "protein_id": "ENSP00000533971.1",
          "transcript_support_level": null,
          "aa_start": 1063,
          "aa_end": null,
          "aa_length": 1078,
          "cds_start": 3189,
          "cds_end": null,
          "cds_length": 3237,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000863912.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3171C>A",
          "hgvs_p": "p.Ala1057Ala",
          "transcript": "NM_001382271.1",
          "protein_id": "NP_001369200.1",
          "transcript_support_level": null,
          "aa_start": 1057,
          "aa_end": null,
          "aa_length": 1072,
          "cds_start": 3171,
          "cds_end": null,
          "cds_length": 3219,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001382271.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3171C>A",
          "hgvs_p": "p.Ala1057Ala",
          "transcript": "ENST00000673038.1",
          "protein_id": "ENSP00000500452.1",
          "transcript_support_level": null,
          "aa_start": 1057,
          "aa_end": null,
          "aa_length": 1072,
          "cds_start": 3171,
          "cds_end": null,
          "cds_length": 3219,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000673038.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3171C>A",
          "hgvs_p": "p.Ala1057Ala",
          "transcript": "ENST00000678220.1",
          "protein_id": "ENSP00000503221.1",
          "transcript_support_level": null,
          "aa_start": 1057,
          "aa_end": null,
          "aa_length": 1072,
          "cds_start": 3171,
          "cds_end": null,
          "cds_length": 3219,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000678220.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3147C>A",
          "hgvs_p": "p.Ala1049Ala",
          "transcript": "NM_001387708.1",
          "protein_id": "NP_001374637.1",
          "transcript_support_level": null,
          "aa_start": 1049,
          "aa_end": null,
          "aa_length": 1064,
          "cds_start": 3147,
          "cds_end": null,
          "cds_length": 3195,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001387708.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3120C>A",
          "hgvs_p": "p.Ala1040Ala",
          "transcript": "NM_001382274.1",
          "protein_id": "NP_001369203.1",
          "transcript_support_level": null,
          "aa_start": 1040,
          "aa_end": null,
          "aa_length": 1055,
          "cds_start": 3120,
          "cds_end": null,
          "cds_length": 3168,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001382274.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3120C>A",
          "hgvs_p": "p.Ala1040Ala",
          "transcript": "NM_001382275.1",
          "protein_id": "NP_001369204.1",
          "transcript_support_level": null,
          "aa_start": 1040,
          "aa_end": null,
          "aa_length": 1055,
          "cds_start": 3120,
          "cds_end": null,
          "cds_length": 3168,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001382275.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3120C>A",
          "hgvs_p": "p.Ala1040Ala",
          "transcript": "ENST00000863904.1",
          "protein_id": "ENSP00000533963.1",
          "transcript_support_level": null,
          "aa_start": 1040,
          "aa_end": null,
          "aa_length": 1055,
          "cds_start": 3120,
          "cds_end": null,
          "cds_length": 3168,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000863904.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3120C>A",
          "hgvs_p": "p.Ala1040Ala",
          "transcript": "ENST00000863911.1",
          "protein_id": "ENSP00000533970.1",
          "transcript_support_level": null,
          "aa_start": 1040,
          "aa_end": null,
          "aa_length": 1055,
          "cds_start": 3120,
          "cds_end": null,
          "cds_length": 3168,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000863911.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3096C>A",
          "hgvs_p": "p.Ala1032Ala",
          "transcript": "NM_001010938.2",
          "protein_id": "NP_001010938.2",
          "transcript_support_level": null,
          "aa_start": 1032,
          "aa_end": null,
          "aa_length": 1047,
          "cds_start": 3096,
          "cds_end": null,
          "cds_length": 3144,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001010938.2"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 14,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3096C>A",
          "hgvs_p": "p.Ala1032Ala",
          "transcript": "ENST00000671753.1",
          "protein_id": "ENSP00000499858.1",
          "transcript_support_level": null,
          "aa_start": 1032,
          "aa_end": null,
          "aa_length": 1047,
          "cds_start": 3096,
          "cds_end": null,
          "cds_length": 3144,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000671753.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "A",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "TNK2",
          "gene_hgnc_id": 19297,
          "hgvs_c": "c.3075C>A",
          "hgvs_p": "p.Ala1025Ala",
          "transcript": "NM_001308046.2",
          "protein_id": "NP_001294975.1",
          "transcript_support_level": null,
          "aa_start": 1025,
          "aa_end": null,
          "aa_length": 1040,
          "cds_start": 3075,
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}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.