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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 3-33535343-G-A (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=3&pos=33535343&ref=G&alt=A&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "3",
      "pos": 33535343,
      "ref": "G",
      "alt": "A",
      "effect": "missense_variant",
      "transcript": "NM_001365628.1",
      "consequences": [
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 34,
          "exon_rank_end": null,
          "exon_count": 39,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3677C>T",
          "hgvs_p": "p.Pro1226Leu",
          "transcript": "NM_001365631.1",
          "protein_id": "NP_001352560.1",
          "transcript_support_level": null,
          "aa_start": 1226,
          "aa_end": null,
          "aa_length": 1506,
          "cds_start": 3677,
          "cds_end": null,
          "cds_length": 4521,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000682230.1",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001365631.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 34,
          "exon_rank_end": null,
          "exon_count": 39,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3677C>T",
          "hgvs_p": "p.Pro1226Leu",
          "transcript": "ENST00000682230.1",
          "protein_id": "ENSP00000507498.1",
          "transcript_support_level": null,
          "aa_start": 1226,
          "aa_end": null,
          "aa_length": 1506,
          "cds_start": 3677,
          "cds_end": null,
          "cds_length": 4521,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_001365631.1",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000682230.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 35,
          "exon_rank_end": null,
          "exon_count": 40,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3764C>T",
          "hgvs_p": "p.Pro1255Leu",
          "transcript": "NM_001365628.1",
          "protein_id": "NP_001352557.1",
          "transcript_support_level": null,
          "aa_start": 1255,
          "aa_end": null,
          "aa_length": 1535,
          "cds_start": 3764,
          "cds_end": null,
          "cds_length": 4608,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001365628.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 35,
          "exon_rank_end": null,
          "exon_count": 40,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3761C>T",
          "hgvs_p": "p.Pro1254Leu",
          "transcript": "NM_001365629.1",
          "protein_id": "NP_001352558.1",
          "transcript_support_level": null,
          "aa_start": 1254,
          "aa_end": null,
          "aa_length": 1534,
          "cds_start": 3761,
          "cds_end": null,
          "cds_length": 4605,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001365629.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 35,
          "exon_rank_end": null,
          "exon_count": 40,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3740C>T",
          "hgvs_p": "p.Pro1247Leu",
          "transcript": "NM_001365627.1",
          "protein_id": "NP_001352556.1",
          "transcript_support_level": null,
          "aa_start": 1247,
          "aa_end": null,
          "aa_length": 1527,
          "cds_start": 3740,
          "cds_end": null,
          "cds_length": 4584,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001365627.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 34,
          "exon_rank_end": null,
          "exon_count": 39,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3737C>T",
          "hgvs_p": "p.Pro1246Leu",
          "transcript": "NM_001375694.1",
          "protein_id": "NP_001362623.1",
          "transcript_support_level": null,
          "aa_start": 1246,
          "aa_end": null,
          "aa_length": 1526,
          "cds_start": 3737,
          "cds_end": null,
          "cds_length": 4581,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001375694.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 33,
          "exon_rank_end": null,
          "exon_count": 38,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3713C>T",
          "hgvs_p": "p.Pro1238Leu",
          "transcript": "NM_001375697.1",
          "protein_id": "NP_001362626.1",
          "transcript_support_level": null,
          "aa_start": 1238,
          "aa_end": null,
          "aa_length": 1518,
          "cds_start": 3713,
          "cds_end": null,
          "cds_length": 4557,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001375697.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 35,
          "exon_rank_end": null,
          "exon_count": 40,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3704C>T",
          "hgvs_p": "p.Pro1235Leu",
          "transcript": "NM_015097.3",
          "protein_id": "NP_055912.2",
          "transcript_support_level": null,
          "aa_start": 1235,
          "aa_end": null,
          "aa_length": 1515,
          "cds_start": 3704,
          "cds_end": null,
          "cds_length": 4548,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_015097.3"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 34,
          "exon_rank_end": null,
          "exon_count": 39,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3701C>T",
          "hgvs_p": "p.Pro1234Leu",
          "transcript": "NM_001375700.1",
          "protein_id": "NP_001362629.1",
          "transcript_support_level": null,
          "aa_start": 1234,
          "aa_end": null,
          "aa_length": 1514,
          "cds_start": 3701,
          "cds_end": null,
          "cds_length": 4545,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001375700.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 34,
          "exon_rank_end": null,
          "exon_count": 39,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3701C>T",
          "hgvs_p": "p.Pro1234Leu",
          "transcript": "NM_001375701.1",
          "protein_id": "NP_001362630.1",
          "transcript_support_level": null,
          "aa_start": 1234,
          "aa_end": null,
          "aa_length": 1514,
          "cds_start": 3701,
          "cds_end": null,
          "cds_length": 4545,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001375701.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 34,
          "exon_rank_end": null,
          "exon_count": 39,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3701C>T",
          "hgvs_p": "p.Pro1234Leu",
          "transcript": "ENST00000468888.6",
          "protein_id": "ENSP00000419974.2",
          "transcript_support_level": 5,
          "aa_start": 1234,
          "aa_end": null,
          "aa_length": 1514,
          "cds_start": 3701,
          "cds_end": null,
          "cds_length": 4545,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000468888.6"
        },
        {
          "aa_ref": "P",
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          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 34,
          "exon_rank_end": null,
          "exon_count": 39,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3698C>T",
          "hgvs_p": "p.Pro1233Leu",
          "transcript": "ENST00000399362.8",
          "protein_id": "ENSP00000382297.4",
          "transcript_support_level": 5,
          "aa_start": 1233,
          "aa_end": null,
          "aa_length": 1513,
          "cds_start": 3698,
          "cds_end": null,
          "cds_length": 4542,
          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "ENST00000399362.8"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 33,
          "exon_rank_end": null,
          "exon_count": 38,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3686C>T",
          "hgvs_p": "p.Pro1229Leu",
          "transcript": "NM_001365630.1",
          "protein_id": "NP_001352559.1",
          "transcript_support_level": null,
          "aa_start": 1229,
          "aa_end": null,
          "aa_length": 1509,
          "cds_start": 3686,
          "cds_end": null,
          "cds_length": 4530,
          "cdna_start": null,
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          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001365630.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 32,
          "exon_rank_end": null,
          "exon_count": 37,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3683C>T",
          "hgvs_p": "p.Pro1228Leu",
          "transcript": "NM_001375705.1",
          "protein_id": "NP_001362634.1",
          "transcript_support_level": null,
          "aa_start": 1228,
          "aa_end": null,
          "aa_length": 1508,
          "cds_start": 3683,
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          "biotype": "protein_coding",
          "feature": "NM_001375705.1"
        },
        {
          "aa_ref": "P",
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          "exon_rank_end": null,
          "exon_count": 38,
          "intron_rank": null,
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          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3677C>T",
          "hgvs_p": "p.Pro1226Leu",
          "transcript": "NM_001400405.1",
          "protein_id": "NP_001387334.1",
          "transcript_support_level": null,
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          "aa_length": 1506,
          "cds_start": 3677,
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          "cdna_start": null,
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          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "NM_001400405.1"
        },
        {
          "aa_ref": "P",
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          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 33,
          "exon_rank_end": null,
          "exon_count": 38,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3674C>T",
          "hgvs_p": "p.Pro1225Leu",
          "transcript": "NM_001365632.1",
          "protein_id": "NP_001352561.1",
          "transcript_support_level": null,
          "aa_start": 1225,
          "aa_end": null,
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          "cds_start": 3674,
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          "cdna_start": null,
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          "biotype": "protein_coding",
          "feature": "NM_001365632.1"
        },
        {
          "aa_ref": "P",
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          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
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          ],
          "exon_rank": 33,
          "exon_rank_end": null,
          "exon_count": 38,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3674C>T",
          "hgvs_p": "p.Pro1225Leu",
          "transcript": "ENST00000912539.1",
          "protein_id": "ENSP00000582598.1",
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        {
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          "intron_rank": null,
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          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3653C>T",
          "hgvs_p": "p.Pro1218Leu",
          "transcript": "ENST00000912540.1",
          "protein_id": "ENSP00000582599.1",
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          "cds_start": 3653,
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          "cdna_start": null,
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        },
        {
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          "consequences": [
            "missense_variant"
          ],
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          "intron_rank": null,
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          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3638C>T",
          "hgvs_p": "p.Pro1213Leu",
          "transcript": "NM_001365633.1",
          "protein_id": "NP_001352562.1",
          "transcript_support_level": null,
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          "cds_start": 3638,
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          "cdna_start": null,
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          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001365633.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 32,
          "exon_rank_end": null,
          "exon_count": 37,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "CLASP2",
          "gene_hgnc_id": 17078,
          "hgvs_c": "c.3635C>T",
          "hgvs_p": "p.Pro1212Leu",
          "transcript": "NM_001365634.1",
          "protein_id": "NP_001352563.1",
          "transcript_support_level": null,
          "aa_start": 1212,
          "aa_end": null,
          "aa_length": 1492,
          "cds_start": 3635,
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      "clinvar_submissions_summary": "US:1",
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}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.