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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 3-78600249-C-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=3&pos=78600249&ref=C&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "3",
      "pos": 78600249,
      "ref": "C",
      "alt": "T",
      "effect": "missense_variant",
      "transcript": "NM_002941.4",
      "consequences": [
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 30,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4805G>A",
          "hgvs_p": "p.Ser1602Asn",
          "transcript": "NM_002941.4",
          "protein_id": "NP_002932.1",
          "transcript_support_level": null,
          "aa_start": 1602,
          "aa_end": null,
          "aa_length": 1651,
          "cds_start": 4805,
          "cds_end": null,
          "cds_length": 4956,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000464233.6",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_002941.4"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 30,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4805G>A",
          "hgvs_p": "p.Ser1602Asn",
          "transcript": "ENST00000464233.6",
          "protein_id": "ENSP00000420321.1",
          "transcript_support_level": 5,
          "aa_start": 1602,
          "aa_end": null,
          "aa_length": 1651,
          "cds_start": 4805,
          "cds_end": null,
          "cds_length": 4956,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_002941.4",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000464233.6"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4670G>A",
          "hgvs_p": "p.Ser1557Asn",
          "transcript": "ENST00000495273.5",
          "protein_id": "ENSP00000420637.1",
          "transcript_support_level": 1,
          "aa_start": 1557,
          "aa_end": null,
          "aa_length": 1606,
          "cds_start": 4670,
          "cds_end": null,
          "cds_length": 4821,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000495273.5"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4505G>A",
          "hgvs_p": "p.Ser1502Asn",
          "transcript": "ENST00000467549.5",
          "protein_id": "ENSP00000417992.1",
          "transcript_support_level": 1,
          "aa_start": 1502,
          "aa_end": null,
          "aa_length": 1551,
          "cds_start": 4505,
          "cds_end": null,
          "cds_length": 4656,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000467549.5"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4670G>A",
          "hgvs_p": "p.Ser1557Asn",
          "transcript": "NM_133631.4",
          "protein_id": "NP_598334.2",
          "transcript_support_level": null,
          "aa_start": 1557,
          "aa_end": null,
          "aa_length": 1606,
          "cds_start": 4670,
          "cds_end": null,
          "cds_length": 4821,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_133631.4"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4505G>A",
          "hgvs_p": "p.Ser1502Asn",
          "transcript": "NM_001145845.2",
          "protein_id": "NP_001139317.1",
          "transcript_support_level": null,
          "aa_start": 1502,
          "aa_end": null,
          "aa_length": 1551,
          "cds_start": 4505,
          "cds_end": null,
          "cds_length": 4656,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001145845.2"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4445G>A",
          "hgvs_p": "p.Ser1482Asn",
          "transcript": "ENST00000436010.6",
          "protein_id": "ENSP00000406043.3",
          "transcript_support_level": 5,
          "aa_start": 1482,
          "aa_end": null,
          "aa_length": 1531,
          "cds_start": 4445,
          "cds_end": null,
          "cds_length": 4596,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000436010.6"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4427G>A",
          "hgvs_p": "p.Ser1476Asn",
          "transcript": "ENST00000618846.4",
          "protein_id": "ENSP00000482448.1",
          "transcript_support_level": 5,
          "aa_start": 1476,
          "aa_end": null,
          "aa_length": 1525,
          "cds_start": 4427,
          "cds_end": null,
          "cds_length": 4578,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000618846.4"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 31,
          "exon_rank_end": null,
          "exon_count": 32,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4814G>A",
          "hgvs_p": "p.Ser1605Asn",
          "transcript": "XM_011533976.1",
          "protein_id": "XP_011532278.1",
          "transcript_support_level": null,
          "aa_start": 1605,
          "aa_end": null,
          "aa_length": 1654,
          "cds_start": 4814,
          "cds_end": null,
          "cds_length": 4965,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011533976.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 31,
          "exon_rank_end": null,
          "exon_count": 32,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4814G>A",
          "hgvs_p": "p.Ser1605Asn",
          "transcript": "XM_011533977.3",
          "protein_id": "XP_011532279.1",
          "transcript_support_level": null,
          "aa_start": 1605,
          "aa_end": null,
          "aa_length": 1654,
          "cds_start": 4814,
          "cds_end": null,
          "cds_length": 4965,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011533977.3"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 30,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4787G>A",
          "hgvs_p": "p.Ser1596Asn",
          "transcript": "XM_011533978.1",
          "protein_id": "XP_011532280.1",
          "transcript_support_level": null,
          "aa_start": 1596,
          "aa_end": null,
          "aa_length": 1645,
          "cds_start": 4787,
          "cds_end": null,
          "cds_length": 4938,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011533978.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 29,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4778G>A",
          "hgvs_p": "p.Ser1593Asn",
          "transcript": "XM_047448661.1",
          "protein_id": "XP_047304617.1",
          "transcript_support_level": null,
          "aa_start": 1593,
          "aa_end": null,
          "aa_length": 1642,
          "cds_start": 4778,
          "cds_end": null,
          "cds_length": 4929,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047448661.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 30,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4730G>A",
          "hgvs_p": "p.Ser1577Asn",
          "transcript": "XM_017006982.2",
          "protein_id": "XP_016862471.1",
          "transcript_support_level": null,
          "aa_start": 1577,
          "aa_end": null,
          "aa_length": 1626,
          "cds_start": 4730,
          "cds_end": null,
          "cds_length": 4881,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017006982.2"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 29,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4697G>A",
          "hgvs_p": "p.Ser1566Asn",
          "transcript": "XM_006713277.4",
          "protein_id": "XP_006713340.1",
          "transcript_support_level": null,
          "aa_start": 1566,
          "aa_end": null,
          "aa_length": 1615,
          "cds_start": 4697,
          "cds_end": null,
          "cds_length": 4848,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_006713277.4"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4691G>A",
          "hgvs_p": "p.Ser1564Asn",
          "transcript": "XM_047448662.1",
          "protein_id": "XP_047304618.1",
          "transcript_support_level": null,
          "aa_start": 1564,
          "aa_end": null,
          "aa_length": 1613,
          "cds_start": 4691,
          "cds_end": null,
          "cds_length": 4842,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047448662.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 28,
          "exon_rank_end": null,
          "exon_count": 29,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4688G>A",
          "hgvs_p": "p.Ser1563Asn",
          "transcript": "XM_017006983.3",
          "protein_id": "XP_016862472.1",
          "transcript_support_level": null,
          "aa_start": 1563,
          "aa_end": null,
          "aa_length": 1612,
          "cds_start": 4688,
          "cds_end": null,
          "cds_length": 4839,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017006983.3"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 27,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4661G>A",
          "hgvs_p": "p.Ser1554Asn",
          "transcript": "XM_047448663.1",
          "protein_id": "XP_047304619.1",
          "transcript_support_level": null,
          "aa_start": 1554,
          "aa_end": null,
          "aa_length": 1603,
          "cds_start": 4661,
          "cds_end": null,
          "cds_length": 4812,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047448663.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 31,
          "exon_rank_end": null,
          "exon_count": 32,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4649G>A",
          "hgvs_p": "p.Ser1550Asn",
          "transcript": "XM_011533979.1",
          "protein_id": "XP_011532281.1",
          "transcript_support_level": null,
          "aa_start": 1550,
          "aa_end": null,
          "aa_length": 1599,
          "cds_start": 4649,
          "cds_end": null,
          "cds_length": 4800,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011533979.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 30,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4640G>A",
          "hgvs_p": "p.Ser1547Asn",
          "transcript": "XM_017006984.1",
          "protein_id": "XP_016862473.1",
          "transcript_support_level": null,
          "aa_start": 1547,
          "aa_end": null,
          "aa_length": 1596,
          "cds_start": 4640,
          "cds_end": null,
          "cds_length": 4791,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017006984.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 30,
          "exon_rank_end": null,
          "exon_count": 31,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4622G>A",
          "hgvs_p": "p.Ser1541Asn",
          "transcript": "XM_011533980.1",
          "protein_id": "XP_011532282.1",
          "transcript_support_level": null,
          "aa_start": 1541,
          "aa_end": null,
          "aa_length": 1590,
          "cds_start": 4622,
          "cds_end": null,
          "cds_length": 4773,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011533980.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 29,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4613G>A",
          "hgvs_p": "p.Ser1538Asn",
          "transcript": "XM_047448664.1",
          "protein_id": "XP_047304620.1",
          "transcript_support_level": null,
          "aa_start": 1538,
          "aa_end": null,
          "aa_length": 1587,
          "cds_start": 4613,
          "cds_end": null,
          "cds_length": 4764,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047448664.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 27,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4496G>A",
          "hgvs_p": "p.Ser1499Asn",
          "transcript": "XM_047448665.1",
          "protein_id": "XP_047304621.1",
          "transcript_support_level": null,
          "aa_start": 1499,
          "aa_end": null,
          "aa_length": 1548,
          "cds_start": 4496,
          "cds_end": null,
          "cds_length": 4647,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047448665.1"
        },
        {
          "aa_ref": "S",
          "aa_alt": "N",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 29,
          "exon_rank_end": null,
          "exon_count": 30,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "c.4457G>A",
          "hgvs_p": "p.Ser1486Asn",
          "transcript": "XM_017006985.2",
          "protein_id": "XP_016862474.1",
          "transcript_support_level": null,
          "aa_start": 1486,
          "aa_end": null,
          "aa_length": 1535,
          "cds_start": 4457,
          "cds_end": null,
          "cds_length": 4608,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017006985.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ROBO1",
          "gene_hgnc_id": 10249,
          "hgvs_c": "n.414G>A",
          "hgvs_p": null,
          "transcript": "ENST00000466906.1",
          "protein_id": null,
          "transcript_support_level": 4,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000466906.1"
        }
      ],
      "gene_symbol": "ROBO1",
      "gene_hgnc_id": 10249,
      "dbsnp": "rs149473563",
      "frequency_reference_population": 0.00012707,
      "hom_count_reference_population": 1,
      "allele_count_reference_population": 205,
      "gnomad_exomes_af": 0.000132101,
      "gnomad_genomes_af": 0.0000788032,
      "gnomad_exomes_ac": 193,
      "gnomad_genomes_ac": 12,
      "gnomad_exomes_homalt": 1,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.020641416311264038,
      "computational_prediction_selected": "Benign",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.173,
      "revel_prediction": "Benign",
      "alphamissense_score": 0.3823,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.24,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 6.251,
      "phylop100way_prediction": "Uncertain_significance",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -10,
      "acmg_classification": "Benign",
      "acmg_criteria": "BP4_Strong,BP6_Moderate,BS1",
      "acmg_by_gene": [
        {
          "score": -10,
          "benign_score": 10,
          "pathogenic_score": 0,
          "criteria": [
            "BP4_Strong",
            "BP6_Moderate",
            "BS1"
          ],
          "verdict": "Benign",
          "transcript": "NM_002941.4",
          "gene_symbol": "ROBO1",
          "hgnc_id": 10249,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AD,AR",
          "hgvs_c": "c.4805G>A",
          "hgvs_p": "p.Ser1602Asn"
        }
      ],
      "clinvar_disease": "not provided",
      "clinvar_classification": "Likely benign",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "LB:1",
      "phenotype_combined": "not provided",
      "pathogenicity_classification_combined": "Likely benign",
      "custom_annotations": null
    }
  ],
  "message": null
}