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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 4-25401644-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=4&pos=25401644&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "4",
"pos": 25401644,
"ref": "C",
"alt": "T",
"effect": "intron_variant",
"transcript": "NM_001286756.2",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "NM_013367.3",
"protein_id": "NP_037499.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 808,
"cds_start": null,
"cds_end": null,
"cds_length": 2427,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000315368.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_013367.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000315368.8",
"protein_id": "ENSP00000318775.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 808,
"cds_start": null,
"cds_end": null,
"cds_length": 2427,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_013367.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000315368.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "NM_001286756.2",
"protein_id": "NP_001273685.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 809,
"cds_start": null,
"cds_end": null,
"cds_length": 2430,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001286756.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000510092.5",
"protein_id": "ENSP00000426654.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 809,
"cds_start": null,
"cds_end": null,
"cds_length": 2430,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000510092.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000902885.1",
"protein_id": "ENSP00000572944.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 808,
"cds_start": null,
"cds_end": null,
"cds_length": 2427,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000902885.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000922645.1",
"protein_id": "ENSP00000592704.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 808,
"cds_start": null,
"cds_end": null,
"cds_length": 2427,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000922645.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1212-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000971381.1",
"protein_id": "ENSP00000641440.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 808,
"cds_start": null,
"cds_end": null,
"cds_length": 2427,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000971381.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1212-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000922643.1",
"protein_id": "ENSP00000592702.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 807,
"cds_start": null,
"cds_end": null,
"cds_length": 2424,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000922643.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000922647.1",
"protein_id": "ENSP00000592706.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 805,
"cds_start": null,
"cds_end": null,
"cds_length": 2418,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000922647.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000971385.1",
"protein_id": "ENSP00000641444.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 805,
"cds_start": null,
"cds_end": null,
"cds_length": 2418,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000971385.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1215-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000902891.1",
"protein_id": "ENSP00000572950.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 803,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000902891.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 29,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1212-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000902893.1",
"protein_id": "ENSP00000572952.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 801,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000902893.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1170-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000922646.1",
"protein_id": "ENSP00000592705.1",
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"cds_start": null,
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"cds_length": 2385,
"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000922646.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 28,
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"gene_symbol": "ANAPC4",
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"hgvs_c": "c.1170-1327C>T",
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"biotype": "protein_coding",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 27,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1170-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000971386.1",
"protein_id": "ENSP00000641445.1",
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"feature": "ENST00000971386.1"
},
{
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"strand": true,
"consequences": [
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],
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"exon_count": 29,
"intron_rank": 16,
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"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
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"transcript": "ENST00000902888.1",
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"feature": "ENST00000902888.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 28,
"intron_rank": 15,
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"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1128-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000902890.1",
"protein_id": "ENSP00000572949.1",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1128-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000902886.1",
"protein_id": "ENSP00000572945.1",
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},
{
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"strand": true,
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],
"exon_rank": null,
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"exon_count": 28,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
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"hgvs_c": "c.1125-1327C>T",
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},
{
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],
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"gene_symbol": "ANAPC4",
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"hgvs_c": "c.1125-1327C>T",
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},
{
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"strand": true,
"consequences": [
"intron_variant"
],
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"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1128-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000971388.1",
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000971388.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANAPC4",
"gene_hgnc_id": 19990,
"hgvs_c": "c.1092-1327C>T",
"hgvs_p": null,
"transcript": "ENST00000971382.1",
"protein_id": "ENSP00000641441.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 768,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000971382.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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}