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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 4-2931840-C-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=4&pos=2931840&ref=C&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "4",
"pos": 2931840,
"ref": "C",
"alt": "A",
"effect": "missense_variant",
"transcript": "NM_001410703.1",
"consequences": [
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SLC75A1",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "NM_001146069.2",
"protein_id": "NP_001139541.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 977,
"cdna_end": null,
"cdna_length": 1717,
"mane_select": "ENST00000355443.9",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001146069.2"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000355443.9",
"protein_id": "ENSP00000347619.4",
"transcript_support_level": 1,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 977,
"cdna_end": null,
"cdna_length": 1717,
"mane_select": "NM_001146069.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000355443.9"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000329687.8",
"protein_id": "ENSP00000332646.4",
"transcript_support_level": 1,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 1434,
"cdna_end": null,
"cdna_length": 2173,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000329687.8"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.1043G>T",
"hgvs_p": "p.Arg348Leu",
"transcript": "ENST00000866678.1",
"protein_id": "ENSP00000536737.1",
"transcript_support_level": null,
"aa_start": 348,
"aa_end": null,
"aa_length": 503,
"cds_start": 1043,
"cds_end": null,
"cds_length": 1512,
"cdna_start": 1146,
"cdna_end": null,
"cdna_length": 1892,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866678.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SLC75A1",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "NM_001410703.1",
"protein_id": "NP_001397632.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 480,
"cds_start": 899,
"cds_end": null,
"cds_length": 1443,
"cdna_start": 977,
"cdna_end": null,
"cdna_length": 1824,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001410703.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000514800.5",
"protein_id": "ENSP00000426907.1",
"transcript_support_level": 5,
"aa_start": 300,
"aa_end": null,
"aa_length": 480,
"cds_start": 899,
"cds_end": null,
"cds_length": 1443,
"cdna_start": 923,
"cdna_end": null,
"cdna_length": 1776,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000514800.5"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.965G>T",
"hgvs_p": "p.Arg322Leu",
"transcript": "ENST00000967828.1",
"protein_id": "ENSP00000637887.1",
"transcript_support_level": null,
"aa_start": 322,
"aa_end": null,
"aa_length": 477,
"cds_start": 965,
"cds_end": null,
"cds_length": 1434,
"cdna_start": 1041,
"cdna_end": null,
"cdna_length": 1780,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000967828.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SLC75A1",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "NM_001120.5",
"protein_id": "NP_001111.3",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 1163,
"cdna_end": null,
"cdna_length": 1903,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001120.5"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000866676.1",
"protein_id": "ENSP00000536735.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 1078,
"cdna_end": null,
"cdna_length": 1818,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866676.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000866679.1",
"protein_id": "ENSP00000536738.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 979,
"cdna_end": null,
"cdna_length": 1723,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866679.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000866682.1",
"protein_id": "ENSP00000536741.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 958,
"cdna_end": null,
"cdna_length": 1698,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866682.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000866683.1",
"protein_id": "ENSP00000536742.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 949,
"cdna_end": null,
"cdna_length": 1689,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866683.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000866684.1",
"protein_id": "ENSP00000536743.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 971,
"cdna_end": null,
"cdna_length": 1709,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866684.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000866685.1",
"protein_id": "ENSP00000536744.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 1000,
"cdna_end": null,
"cdna_length": 1740,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866685.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000932269.1",
"protein_id": "ENSP00000602328.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 946,
"cdna_end": null,
"cdna_length": 1686,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000932269.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000967825.1",
"protein_id": "ENSP00000637884.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 455,
"cds_start": 899,
"cds_end": null,
"cds_length": 1368,
"cdna_start": 1174,
"cdna_end": null,
"cdna_length": 1914,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000967825.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000932268.1",
"protein_id": "ENSP00000602327.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 452,
"cds_start": 899,
"cds_end": null,
"cds_length": 1359,
"cdna_start": 977,
"cdna_end": null,
"cdna_length": 1710,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000932268.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.875G>T",
"hgvs_p": "p.Arg292Leu",
"transcript": "ENST00000967827.1",
"protein_id": "ENSP00000637886.1",
"transcript_support_level": null,
"aa_start": 292,
"aa_end": null,
"aa_length": 447,
"cds_start": 875,
"cds_end": null,
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"cdna_start": 960,
"cdna_end": null,
"cdna_length": 1697,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000967827.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.899G>T",
"hgvs_p": "p.Arg300Leu",
"transcript": "ENST00000967830.1",
"protein_id": "ENSP00000637889.1",
"transcript_support_level": null,
"aa_start": 300,
"aa_end": null,
"aa_length": 409,
"cds_start": 899,
"cds_end": null,
"cds_length": 1230,
"cdna_start": 960,
"cdna_end": null,
"cdna_length": 1560,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000967830.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.749G>T",
"hgvs_p": "p.Arg250Leu",
"transcript": "ENST00000866681.1",
"protein_id": "ENSP00000536740.1",
"transcript_support_level": null,
"aa_start": 250,
"aa_end": null,
"aa_length": 405,
"cds_start": 749,
"cds_end": null,
"cds_length": 1218,
"cdna_start": 802,
"cdna_end": null,
"cdna_length": 1548,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866681.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.740G>T",
"hgvs_p": "p.Arg247Leu",
"transcript": "ENST00000866680.1",
"protein_id": "ENSP00000536739.1",
"transcript_support_level": null,
"aa_start": 247,
"aa_end": null,
"aa_length": 402,
"cds_start": 740,
"cds_end": null,
"cds_length": 1209,
"cdna_start": 801,
"cdna_end": null,
"cdna_length": 1545,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000866680.1"
},
{
"aa_ref": "R",
"aa_alt": "L",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MFSD10",
"gene_hgnc_id": 16894,
"hgvs_c": "c.737G>T",
"hgvs_p": "p.Arg246Leu",
"transcript": "ENST00000866677.1",
"protein_id": "ENSP00000536736.1",
"transcript_support_level": null,
"aa_start": 246,
"aa_end": null,
"aa_length": 401,
"cds_start": 737,
"cds_end": null,
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}
],
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}