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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 4-47595892-ACC-GCA (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=4&pos=47595892&ref=ACC&alt=GCA&genome=hg38&allGenes=true"

API Response

json
{
  "message": null,
  "variants": [
    {
      "acmg_by_gene": [
        {
          "benign_score": 0,
          "criteria": [
            "PP3"
          ],
          "effects": [
            "missense_variant"
          ],
          "gene_symbol": "CORIN",
          "hgnc_id": 19012,
          "hgvs_c": "c.2956_2958delGGTinsTGC",
          "hgvs_p": "p.Gly986Cys",
          "inheritance_mode": "Unknown",
          "pathogenic_score": 1,
          "score": 1,
          "transcript": "NM_006587.4",
          "verdict": "Uncertain_significance"
        }
      ],
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PP3",
      "acmg_score": 1,
      "allele_count_reference_population": 0,
      "alphamissense_prediction": null,
      "alphamissense_score": null,
      "alt": "GCA",
      "apogee2_prediction": null,
      "apogee2_score": null,
      "bayesdelnoaf_prediction": null,
      "bayesdelnoaf_score": null,
      "chr": "4",
      "clinvar_classification": "",
      "clinvar_disease": "",
      "clinvar_review_status": "",
      "clinvar_submissions_summary": "",
      "computational_prediction_selected": null,
      "computational_score_selected": null,
      "computational_source_selected": null,
      "consequences": [
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1042,
          "aa_ref": "G",
          "aa_start": 986,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4967,
          "cdna_start": 3076,
          "cds_end": null,
          "cds_length": 3129,
          "cds_start": 2956,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_006587.4",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2956_2958delGGTinsTGC",
          "hgvs_p": "p.Gly986Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "ENST00000273857.9",
          "protein_coding": true,
          "protein_id": "NP_006578.2",
          "strand": false,
          "transcript": "NM_006587.4",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1042,
          "aa_ref": "G",
          "aa_start": 986,
          "biotype": "protein_coding",
          "canonical": true,
          "cdna_end": null,
          "cdna_length": 4967,
          "cdna_start": 3076,
          "cds_end": null,
          "cds_length": 3129,
          "cds_start": 2956,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000273857.9",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2956_2958delGGTinsTGC",
          "hgvs_p": "p.Gly986Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "NM_006587.4",
          "protein_coding": true,
          "protein_id": "ENSP00000273857.4",
          "strand": false,
          "transcript": "ENST00000273857.9",
          "transcript_support_level": 1
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1067,
          "aa_ref": "G",
          "aa_start": 1011,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3609,
          "cdna_start": 3212,
          "cds_end": null,
          "cds_length": 3204,
          "cds_start": 3031,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961995.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.3031_3033delGGTinsTGC",
          "hgvs_p": "p.Gly1011Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632054.1",
          "strand": false,
          "transcript": "ENST00000961995.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1036,
          "aa_ref": "G",
          "aa_start": 980,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 5012,
          "cdna_start": 3119,
          "cds_end": null,
          "cds_length": 3111,
          "cds_start": 2938,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961980.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2938_2940delGGTinsTGC",
          "hgvs_p": "p.Gly980Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632039.1",
          "strand": false,
          "transcript": "ENST00000961980.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1015,
          "aa_ref": "G",
          "aa_start": 959,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4888,
          "cdna_start": 3000,
          "cds_end": null,
          "cds_length": 3048,
          "cds_start": 2875,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961985.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2875_2877delGGTinsTGC",
          "hgvs_p": "p.Gly959Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632044.1",
          "strand": false,
          "transcript": "ENST00000961985.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1011,
          "aa_ref": "G",
          "aa_start": 955,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4872,
          "cdna_start": 2983,
          "cds_end": null,
          "cds_length": 3036,
          "cds_start": 2863,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961989.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2863_2865delGGTinsTGC",
          "hgvs_p": "p.Gly955Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632048.1",
          "strand": false,
          "transcript": "ENST00000961989.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1006,
          "aa_ref": "G",
          "aa_start": 950,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4893,
          "cdna_start": 3002,
          "cds_end": null,
          "cds_length": 3021,
          "cds_start": 2848,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000891633.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2848_2850delGGTinsTGC",
          "hgvs_p": "p.Gly950Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000561692.1",
          "strand": false,
          "transcript": "ENST00000891633.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1006,
          "aa_ref": "G",
          "aa_start": 950,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3687,
          "cdna_start": 3033,
          "cds_end": null,
          "cds_length": 3021,
          "cds_start": 2848,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000891636.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2848_2850delGGTinsTGC",
          "hgvs_p": "p.Gly950Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000561695.1",
          "strand": false,
          "transcript": "ENST00000891636.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1005,
          "aa_ref": "G",
          "aa_start": 949,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3018,
          "cdna_start": 2847,
          "cds_end": null,
          "cds_length": 3018,
          "cds_start": 2845,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000505909.5",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2845_2847delGGTinsTGC",
          "hgvs_p": "p.Gly949Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000425401.1",
          "strand": false,
          "transcript": "ENST00000505909.5",
          "transcript_support_level": 5
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1004,
          "aa_ref": "G",
          "aa_start": 948,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4892,
          "cdna_start": 3001,
          "cds_end": null,
          "cds_length": 3015,
          "cds_start": 2842,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000891632.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2842_2844delGGTinsTGC",
          "hgvs_p": "p.Gly948Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000561691.1",
          "strand": false,
          "transcript": "ENST00000891632.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 1003,
          "aa_ref": "G",
          "aa_start": 947,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4847,
          "cdna_start": 2959,
          "cds_end": null,
          "cds_length": 3012,
          "cds_start": 2839,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961993.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2839_2841delGGTinsTGC",
          "hgvs_p": "p.Gly947Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632052.1",
          "strand": false,
          "transcript": "ENST00000961993.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 979,
          "aa_ref": "G",
          "aa_start": 923,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3736,
          "cdna_start": 2946,
          "cds_end": null,
          "cds_length": 2940,
          "cds_start": 2767,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 20,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961994.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2767_2769delGGTinsTGC",
          "hgvs_p": "p.Gly923Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632053.1",
          "strand": false,
          "transcript": "ENST00000961994.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 975,
          "aa_ref": "G",
          "aa_start": 919,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3112,
          "cdna_start": 2880,
          "cds_end": null,
          "cds_length": 2928,
          "cds_start": 2755,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000502252.5",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2755_2757delGGTinsTGC",
          "hgvs_p": "p.Gly919Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000424212.1",
          "strand": false,
          "transcript": "ENST00000502252.5",
          "transcript_support_level": 2
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 970,
          "aa_ref": "G",
          "aa_start": 914,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4788,
          "cdna_start": 2899,
          "cds_end": null,
          "cds_length": 2913,
          "cds_start": 2740,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 20,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961982.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2740_2742delGGTinsTGC",
          "hgvs_p": "p.Gly914Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632041.1",
          "strand": false,
          "transcript": "ENST00000961982.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 969,
          "aa_ref": "G",
          "aa_start": 913,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3713,
          "cdna_start": 2922,
          "cds_end": null,
          "cds_length": 2910,
          "cds_start": 2737,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 20,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000891635.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2737_2739delGGTinsTGC",
          "hgvs_p": "p.Gly913Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000561694.1",
          "strand": false,
          "transcript": "ENST00000891635.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 969,
          "aa_ref": "G",
          "aa_start": 913,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4782,
          "cdna_start": 2896,
          "cds_end": null,
          "cds_length": 2910,
          "cds_start": 2737,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961984.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2737_2739delGGTinsTGC",
          "hgvs_p": "p.Gly913Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632043.1",
          "strand": false,
          "transcript": "ENST00000961984.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 969,
          "aa_ref": "G",
          "aa_start": 913,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4748,
          "cdna_start": 2857,
          "cds_end": null,
          "cds_length": 2910,
          "cds_start": 2737,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 20,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961988.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2737_2739delGGTinsTGC",
          "hgvs_p": "p.Gly913Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632047.1",
          "strand": false,
          "transcript": "ENST00000961988.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 967,
          "aa_ref": "G",
          "aa_start": 911,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4739,
          "cdna_start": 2851,
          "cds_end": null,
          "cds_length": 2904,
          "cds_start": 2731,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 20,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000961991.1",
          "gene_hgnc_id": 19012,
          "gene_symbol": "CORIN",
          "hgvs_c": "c.2731_2733delGGTinsTGC",
          "hgvs_p": "p.Gly911Cys",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000632050.1",
          "strand": false,
          "transcript": "ENST00000961991.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "C",
          "aa_end": null,
          "aa_length": 939,
          "aa_ref": "G",
          "aa_start": 883,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4663,
          "cdna_start": 2772,
          "cds_end": null,
          "cds_length": 2820,
          "cds_start": 2647,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 20,
          "exon_rank": null,
          "exon_rank_end": null,
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For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.