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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 5-151125955-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=5&pos=151125955&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "5",
"pos": 151125955,
"ref": "T",
"alt": "C",
"effect": "intron_variant",
"transcript": "NM_001155.5",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "NM_001155.5",
"protein_id": "NP_001146.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 673,
"cds_start": null,
"cds_end": null,
"cds_length": 2022,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000354546.10",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001155.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000354546.10",
"protein_id": "ENSP00000346550.5",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 673,
"cds_start": null,
"cds_end": null,
"cds_length": 2022,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001155.5",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000354546.10"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000941434.1",
"protein_id": "ENSP00000611493.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 705,
"cds_start": null,
"cds_end": null,
"cds_length": 2118,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000941434.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 13,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1134+447A>G",
"hgvs_p": null,
"transcript": "ENST00000935749.1",
"protein_id": "ENSP00000605808.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 699,
"cds_start": null,
"cds_end": null,
"cds_length": 2100,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935749.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000941435.1",
"protein_id": "ENSP00000611494.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 699,
"cds_start": null,
"cds_end": null,
"cds_length": 2100,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000941435.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000941440.1",
"protein_id": "ENSP00000611499.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 699,
"cds_start": null,
"cds_end": null,
"cds_length": 2100,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000941440.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000941436.1",
"protein_id": "ENSP00000611495.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 693,
"cds_start": null,
"cds_end": null,
"cds_length": 2082,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000941436.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000941438.1",
"protein_id": "ENSP00000611497.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 690,
"cds_start": null,
"cds_end": null,
"cds_length": 2073,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000941438.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000893683.1",
"protein_id": "ENSP00000563742.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 688,
"cds_start": null,
"cds_end": null,
"cds_length": 2067,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000893683.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000893677.1",
"protein_id": "ENSP00000563736.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 673,
"cds_start": null,
"cds_end": null,
"cds_length": 2022,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000893677.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000893679.1",
"protein_id": "ENSP00000563738.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 673,
"cds_start": null,
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"cds_length": 2022,
"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000893679.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 27,
"intron_rank": 15,
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"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000893680.1",
"protein_id": "ENSP00000563739.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 673,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000893680.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 27,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000941437.1",
"protein_id": "ENSP00000611496.1",
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000941437.1"
},
{
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"canonical": false,
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 14,
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"gene_symbol": "ANXA6",
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"hgvs_c": "c.1056+447A>G",
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"transcript": "ENST00000941439.1",
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"cdna_start": null,
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"feature": "ENST00000941439.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "NM_001363114.2",
"protein_id": "NP_001350043.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 667,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "NM_001363114.2"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 14,
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"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000700367.1",
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"feature": "ENST00000700367.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000893689.1",
"protein_id": "ENSP00000563748.1",
"transcript_support_level": null,
"aa_start": null,
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000893689.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 26,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1026+447A>G",
"hgvs_p": null,
"transcript": "ENST00000893685.1",
"protein_id": "ENSP00000563744.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 663,
"cds_start": null,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 14,
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"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1011+492A>G",
"hgvs_p": null,
"transcript": "ENST00000893678.1",
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 13,
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"gene_symbol": "ANXA6",
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"hgvs_c": "c.960+447A>G",
"hgvs_p": null,
"transcript": "NM_001193544.2",
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"feature": "NM_001193544.2"
},
{
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"strand": false,
"consequences": [
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],
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"gene_symbol": "ANXA6",
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"hgvs_c": "c.960+447A>G",
"hgvs_p": null,
"transcript": "ENST00000523714.5",
"protein_id": "ENSP00000430517.1",
"transcript_support_level": 2,
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"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000523714.5"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "ANXA6",
"gene_hgnc_id": 544,
"hgvs_c": "c.1056+447A>G",
"hgvs_p": null,
"transcript": "ENST00000893681.1",
"protein_id": "ENSP00000563740.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000893681.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 14,
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