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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 5-78039122-A-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=5&pos=78039122&ref=A&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "5",
      "pos": 78039122,
      "ref": "A",
      "alt": "C",
      "effect": "synonymous_variant",
      "transcript": "NM_003664.5",
      "consequences": [
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2730T>G",
          "hgvs_p": "p.Thr910Thr",
          "transcript": "NM_003664.5",
          "protein_id": "NP_003655.3",
          "transcript_support_level": null,
          "aa_start": 910,
          "aa_end": null,
          "aa_length": 1094,
          "cds_start": 2730,
          "cds_end": null,
          "cds_length": 3285,
          "cdna_start": 2849,
          "cdna_end": null,
          "cdna_length": 3980,
          "mane_select": "ENST00000255194.11",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2730T>G",
          "hgvs_p": "p.Thr910Thr",
          "transcript": "ENST00000255194.11",
          "protein_id": "ENSP00000255194.7",
          "transcript_support_level": 1,
          "aa_start": 910,
          "aa_end": null,
          "aa_length": 1094,
          "cds_start": 2730,
          "cds_end": null,
          "cds_length": 3285,
          "cdna_start": 2849,
          "cdna_end": null,
          "cdna_length": 3980,
          "mane_select": "NM_003664.5",
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2583T>G",
          "hgvs_p": "p.Thr861Thr",
          "transcript": "ENST00000519295.7",
          "protein_id": "ENSP00000430597.1",
          "transcript_support_level": 1,
          "aa_start": 861,
          "aa_end": null,
          "aa_length": 1045,
          "cds_start": 2583,
          "cds_end": null,
          "cds_length": 3138,
          "cdna_start": 2897,
          "cdna_end": null,
          "cdna_length": 14714,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2730T>G",
          "hgvs_p": "p.Thr910Thr",
          "transcript": "ENST00000695515.1",
          "protein_id": "ENSP00000511978.1",
          "transcript_support_level": null,
          "aa_start": 910,
          "aa_end": null,
          "aa_length": 1055,
          "cds_start": 2730,
          "cds_end": null,
          "cds_length": 3168,
          "cdna_start": 2730,
          "cdna_end": null,
          "cdna_length": 3744,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2730T>G",
          "hgvs_p": "p.Thr910Thr",
          "transcript": "ENST00000695511.1",
          "protein_id": "ENSP00000511974.1",
          "transcript_support_level": null,
          "aa_start": 910,
          "aa_end": null,
          "aa_length": 1053,
          "cds_start": 2730,
          "cds_end": null,
          "cds_length": 3162,
          "cdna_start": 2888,
          "cdna_end": null,
          "cdna_length": 4045,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2724T>G",
          "hgvs_p": "p.Thr908Thr",
          "transcript": "ENST00000695454.1",
          "protein_id": "ENSP00000511922.1",
          "transcript_support_level": null,
          "aa_start": 908,
          "aa_end": null,
          "aa_length": 1051,
          "cds_start": 2724,
          "cds_end": null,
          "cds_length": 3156,
          "cdna_start": 2907,
          "cdna_end": null,
          "cdna_length": 4064,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2595T>G",
          "hgvs_p": "p.Thr865Thr",
          "transcript": "ENST00000695513.1",
          "protein_id": "ENSP00000511976.1",
          "transcript_support_level": null,
          "aa_start": 865,
          "aa_end": null,
          "aa_length": 1049,
          "cds_start": 2595,
          "cds_end": null,
          "cds_length": 3150,
          "cdna_start": 2855,
          "cdna_end": null,
          "cdna_length": 3973,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 27,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2583T>G",
          "hgvs_p": "p.Thr861Thr",
          "transcript": "NM_001271769.2",
          "protein_id": "NP_001258698.1",
          "transcript_support_level": null,
          "aa_start": 861,
          "aa_end": null,
          "aa_length": 1045,
          "cds_start": 2583,
          "cds_end": null,
          "cds_length": 3138,
          "cdna_start": 2861,
          "cdna_end": null,
          "cdna_length": 5796,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2673T>G",
          "hgvs_p": "p.Thr891Thr",
          "transcript": "ENST00000695453.1",
          "protein_id": "ENSP00000511921.1",
          "transcript_support_level": null,
          "aa_start": 891,
          "aa_end": null,
          "aa_length": 1034,
          "cds_start": 2673,
          "cds_end": null,
          "cds_length": 3105,
          "cdna_start": 2820,
          "cdna_end": null,
          "cdna_length": 3977,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 21,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2550T>G",
          "hgvs_p": "p.Thr850Thr",
          "transcript": "ENST00000695512.1",
          "protein_id": "ENSP00000511975.1",
          "transcript_support_level": null,
          "aa_start": 850,
          "aa_end": null,
          "aa_length": 1034,
          "cds_start": 2550,
          "cds_end": null,
          "cds_length": 3105,
          "cdna_start": 2708,
          "cdna_end": null,
          "cdna_length": 3794,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2730T>G",
          "hgvs_p": "p.Thr910Thr",
          "transcript": "ENST00000695510.1",
          "protein_id": "ENSP00000511973.1",
          "transcript_support_level": null,
          "aa_start": 910,
          "aa_end": null,
          "aa_length": 1008,
          "cds_start": 2730,
          "cds_end": null,
          "cds_length": 3027,
          "cdna_start": 2888,
          "cdna_end": null,
          "cdna_length": 3833,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.2583T>G",
          "hgvs_p": "p.Thr861Thr",
          "transcript": "ENST00000695455.1",
          "protein_id": "ENSP00000511923.1",
          "transcript_support_level": null,
          "aa_start": 861,
          "aa_end": null,
          "aa_length": 1004,
          "cds_start": 2583,
          "cds_end": null,
          "cds_length": 3015,
          "cdna_start": 2858,
          "cdna_end": null,
          "cdna_length": 4015,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 17,
          "exon_rank_end": null,
          "exon_count": 21,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.1929T>G",
          "hgvs_p": "p.Thr643Thr",
          "transcript": "ENST00000695450.1",
          "protein_id": "ENSP00000511919.1",
          "transcript_support_level": null,
          "aa_start": 643,
          "aa_end": null,
          "aa_length": 827,
          "cds_start": 1929,
          "cds_end": null,
          "cds_length": 2484,
          "cdna_start": 1974,
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          "cdna_length": 3090,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": "T",
          "aa_alt": "T",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "synonymous_variant"
          ],
          "exon_rank": 1,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "c.27T>G",
          "hgvs_p": "p.Thr9Thr",
          "transcript": "ENST00000522901.1",
          "protein_id": "ENSP00000429228.1",
          "transcript_support_level": 3,
          "aa_start": 9,
          "aa_end": null,
          "aa_length": 153,
          "cds_start": 27,
          "cds_end": null,
          "cds_length": 462,
          "cdna_start": 29,
          "cdna_end": null,
          "cdna_length": 1170,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
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          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.530T>G",
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          "protein_id": null,
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
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          "cdna_start": null,
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          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 22,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.*40T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695447.1",
          "protein_id": "ENSP00000511917.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 3175,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.*2492T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695451.1",
          "protein_id": "ENSP00000511920.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 4175,
          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
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          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.445T>G",
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          "protein_id": null,
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          "aa_start": null,
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          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.2730T>G",
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          "transcript": "ENST00000695488.1",
          "protein_id": "ENSP00000511959.1",
          "transcript_support_level": null,
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          "aa_length": null,
          "cds_start": -4,
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          "cdna_length": 4042,
          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.2888T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695505.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4765,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.382T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695506.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 1488,
          "mane_select": null,
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        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
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          "hgvs_c": "n.*255T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695507.1",
          "protein_id": "ENSP00000511970.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 4108,
          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 22,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.*40T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695447.1",
          "protein_id": "ENSP00000511917.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3175,
          "mane_select": null,
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          "biotype": null,
          "feature": null
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.*2492T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695451.1",
          "protein_id": "ENSP00000511920.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
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          "cdna_length": 4175,
          "mane_select": null,
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          "feature": null
        },
        {
          "aa_ref": null,
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          "protein_coding": false,
          "strand": false,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 28,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "AP3B1",
          "gene_hgnc_id": 566,
          "hgvs_c": "n.*255T>G",
          "hgvs_p": null,
          "transcript": "ENST00000695507.1",
          "protein_id": "ENSP00000511970.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": -4,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4108,
          "mane_select": null,
          "mane_plus": null,
          "biotype": null,
          "feature": null
        }
      ],
      "gene_symbol": "AP3B1",
      "gene_hgnc_id": 566,
      "dbsnp": "rs143527588",
      "frequency_reference_population": 0.0000024788062,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 4,
      "gnomad_exomes_af": 0.00000136844,
      "gnomad_genomes_af": 0.0000131442,
      "gnomad_exomes_ac": 2,
      "gnomad_genomes_ac": 2,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.0989999994635582,
      "computational_prediction_selected": "Benign",
      "computational_source_selected": "REVEL",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.099,
      "revel_prediction": "Benign",
      "alphamissense_score": null,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.53,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 0.754,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -3,
      "acmg_classification": "Likely_benign",
      "acmg_criteria": "PM2,BP4_Moderate,BP6_Moderate,BP7",
      "acmg_by_gene": [
        {
          "score": -3,
          "benign_score": 5,
          "pathogenic_score": 2,
          "criteria": [
            "PM2",
            "BP4_Moderate",
            "BP6_Moderate",
            "BP7"
          ],
          "verdict": "Likely_benign",
          "transcript": "NM_003664.5",
          "gene_symbol": "AP3B1",
          "hgnc_id": 566,
          "effects": [
            "synonymous_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.2730T>G",
          "hgvs_p": "p.Thr910Thr"
        }
      ],
      "clinvar_disease": "Hermansky-Pudlak syndrome 2",
      "clinvar_classification": "Likely benign",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "LB:1",
      "phenotype_combined": "Hermansky-Pudlak syndrome 2",
      "pathogenicity_classification_combined": "Likely benign",
      "custom_annotations": null
    }
  ],
  "message": null
}