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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 6-130184159-C-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=130184159&ref=C&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "6",
      "pos": 130184159,
      "ref": "C",
      "alt": "T",
      "effect": "missense_variant",
      "transcript": "NM_001277185.2",
      "consequences": [
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "NM_001017373.4",
          "protein_id": "NP_001017373.2",
          "transcript_support_level": null,
          "aa_start": 200,
          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000439090.7",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001017373.4"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "ENST00000439090.7",
          "protein_id": "ENSP00000403565.2",
          "transcript_support_level": 2,
          "aa_start": 200,
          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_001017373.4",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000439090.7"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "ENST00000324172.10",
          "protein_id": "ENSP00000324874.6",
          "transcript_support_level": 1,
          "aa_start": 200,
          "aa_end": null,
          "aa_length": 221,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 666,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000324172.10"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "n.*482G>A",
          "hgvs_p": null,
          "transcript": "ENST00000524930.1",
          "protein_id": "ENSP00000436997.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000524930.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "n.1183G>A",
          "hgvs_p": null,
          "transcript": "ENST00000533296.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000533296.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "n.*482G>A",
          "hgvs_p": null,
          "transcript": "ENST00000524930.1",
          "protein_id": "ENSP00000436997.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000524930.1"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.670G>A",
          "hgvs_p": "p.Val224Met",
          "transcript": "NM_001277185.2",
          "protein_id": "NP_001264114.1",
          "transcript_support_level": null,
          "aa_start": 224,
          "aa_end": null,
          "aa_length": 544,
          "cds_start": 670,
          "cds_end": null,
          "cds_length": 1635,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001277185.2"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.670G>A",
          "hgvs_p": "p.Val224Met",
          "transcript": "ENST00000457563.6",
          "protein_id": "ENSP00000402092.2",
          "transcript_support_level": 2,
          "aa_start": 224,
          "aa_end": null,
          "aa_length": 544,
          "cds_start": 670,
          "cds_end": null,
          "cds_length": 1635,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000457563.6"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "NM_001258275.3",
          "protein_id": "NP_001245204.1",
          "transcript_support_level": null,
          "aa_start": 200,
          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001258275.3"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 9,
          "exon_rank_end": null,
          "exon_count": 14,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "ENST00000368134.6",
          "protein_id": "ENSP00000357116.2",
          "transcript_support_level": 2,
          "aa_start": 200,
          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000368134.6"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "ENST00000437477.6",
          "protein_id": "ENSP00000391163.2",
          "transcript_support_level": 5,
          "aa_start": 200,
          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000437477.6"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.592G>A",
          "hgvs_p": "p.Val198Met",
          "transcript": "ENST00000532763.5",
          "protein_id": "ENSP00000436088.1",
          "transcript_support_level": 5,
          "aa_start": 198,
          "aa_end": null,
          "aa_length": 275,
          "cds_start": 592,
          "cds_end": null,
          "cds_length": 828,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000532763.5"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
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          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.595G>A",
          "hgvs_p": "p.Val199Met",
          "transcript": "ENST00000532309.5",
          "protein_id": "ENSP00000436115.1",
          "transcript_support_level": 3,
          "aa_start": 199,
          "aa_end": null,
          "aa_length": 209,
          "cds_start": 595,
          "cds_end": null,
          "cds_length": 631,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000532309.5"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.658G>A",
          "hgvs_p": "p.Val220Met",
          "transcript": "XM_024446333.2",
          "protein_id": "XP_024302101.1",
          "transcript_support_level": null,
          "aa_start": 220,
          "aa_end": null,
          "aa_length": 540,
          "cds_start": 658,
          "cds_end": null,
          "cds_length": 1623,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_024446333.2"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
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          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.655G>A",
          "hgvs_p": "p.Val219Met",
          "transcript": "XM_017010305.2",
          "protein_id": "XP_016865794.1",
          "transcript_support_level": null,
          "aa_start": 219,
          "aa_end": null,
          "aa_length": 539,
          "cds_start": 655,
          "cds_end": null,
          "cds_length": 1620,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017010305.2"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 8,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "XM_024446335.2",
          "protein_id": "XP_024302103.1",
          "transcript_support_level": null,
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          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "XM_024446335.2"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "XM_024446337.2",
          "protein_id": "XP_024302105.1",
          "transcript_support_level": null,
          "aa_start": 200,
          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
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          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
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        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
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          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.598G>A",
          "hgvs_p": "p.Val200Met",
          "transcript": "XM_047418239.1",
          "protein_id": "XP_047274195.1",
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          "aa_start": 200,
          "aa_end": null,
          "aa_length": 520,
          "cds_start": 598,
          "cds_end": null,
          "cds_length": 1563,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047418239.1"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.658G>A",
          "hgvs_p": "p.Val220Met",
          "transcript": "XM_017010308.3",
          "protein_id": "XP_016865797.2",
          "transcript_support_level": null,
          "aa_start": 220,
          "aa_end": null,
          "aa_length": 374,
          "cds_start": 658,
          "cds_end": null,
          "cds_length": 1125,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017010308.3"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.658G>A",
          "hgvs_p": "p.Val220Met",
          "transcript": "XM_017010309.3",
          "protein_id": "XP_016865798.2",
          "transcript_support_level": null,
          "aa_start": 220,
          "aa_end": null,
          "aa_length": 258,
          "cds_start": 658,
          "cds_end": null,
          "cds_length": 777,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017010309.3"
        },
        {
          "aa_ref": "V",
          "aa_alt": "M",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "c.658G>A",
          "hgvs_p": "p.Val220Met",
          "transcript": "XM_017010310.3",
          "protein_id": "XP_016865799.2",
          "transcript_support_level": null,
          "aa_start": 220,
          "aa_end": null,
          "aa_length": 249,
          "cds_start": 658,
          "cds_end": null,
          "cds_length": 750,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017010310.3"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "n.224G>A",
          "hgvs_p": null,
          "transcript": "ENST00000526886.5",
          "protein_id": null,
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "retained_intron",
          "feature": "ENST00000526886.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "n.251G>A",
          "hgvs_p": null,
          "transcript": "ENST00000528422.5",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000528422.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "SAMD3",
          "gene_hgnc_id": 21574,
          "hgvs_c": "n.785G>A",
          "hgvs_p": null,
          "transcript": "XR_001743174.3",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "XR_001743174.3"
        }
      ],
      "gene_symbol": "SAMD3",
      "gene_hgnc_id": 21574,
      "dbsnp": "rs746454475",
      "frequency_reference_population": 0.00004647295,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 75,
      "gnomad_exomes_af": 0.0000492638,
      "gnomad_genomes_af": 0.0000196949,
      "gnomad_exomes_ac": 72,
      "gnomad_genomes_ac": 3,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.5118623375892639,
      "computational_prediction_selected": "Uncertain_significance",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0.019999999552965164,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.35,
      "revel_prediction": "Uncertain_significance",
      "alphamissense_score": 0.6138,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": 0.21,
      "bayesdelnoaf_prediction": "Pathogenic",
      "phylop100way_score": 5.105,
      "phylop100way_prediction": "Uncertain_significance",
      "spliceai_max_score": 0.02,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": 2,
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "PM2",
      "acmg_by_gene": [
        {
          "score": 2,
          "benign_score": 0,
          "pathogenic_score": 2,
          "criteria": [
            "PM2"
          ],
          "verdict": "Uncertain_significance",
          "transcript": "NM_001277185.2",
          "gene_symbol": "SAMD3",
          "hgnc_id": 21574,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AR",
          "hgvs_c": "c.670G>A",
          "hgvs_p": "p.Val224Met"
        }
      ],
      "clinvar_disease": "not specified",
      "clinvar_classification": "Uncertain significance",
      "clinvar_review_status": "criteria provided, single submitter",
      "clinvar_submissions_summary": "US:1",
      "phenotype_combined": "not specified",
      "pathogenicity_classification_combined": "Uncertain significance",
      "custom_annotations": null
    }
  ],
  "message": null
}