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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 6-26374675-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=26374675&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "6",
"pos": 26374675,
"ref": "A",
"alt": "G",
"effect": "intron_variant",
"transcript": "NM_007047.5",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "NM_007047.5",
"protein_id": "NP_008978.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
"cds_end": null,
"cds_length": 1005,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3776,
"mane_select": "ENST00000377708.7",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_007047.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000377708.7",
"protein_id": "ENSP00000366937.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
"cds_end": null,
"cds_length": 1005,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3776,
"mane_select": "NM_007047.5",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000377708.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872162.1",
"protein_id": "ENSP00000542221.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 339,
"cds_start": null,
"cds_end": null,
"cds_length": 1020,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3694,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872162.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872180.1",
"protein_id": "ENSP00000542239.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 339,
"cds_start": null,
"cds_end": null,
"cds_length": 1020,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1763,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872180.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872183.1",
"protein_id": "ENSP00000542242.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 339,
"cds_start": null,
"cds_end": null,
"cds_length": 1020,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2021,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872183.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872193.1",
"protein_id": "ENSP00000542252.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 339,
"cds_start": null,
"cds_end": null,
"cds_length": 1020,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1575,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872193.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000957869.1",
"protein_id": "ENSP00000627928.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 339,
"cds_start": null,
"cds_end": null,
"cds_length": 1020,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3032,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000957869.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000957884.1",
"protein_id": "ENSP00000627943.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 339,
"cds_start": null,
"cds_end": null,
"cds_length": 1020,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1666,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000957884.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "NM_001197246.2",
"protein_id": "NP_001184175.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
"cds_end": null,
"cds_length": 1005,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2836,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001197246.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "NM_001197247.3",
"protein_id": "NP_001184176.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
"cds_end": null,
"cds_length": 1005,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4068,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001197247.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000356386.6",
"protein_id": "ENSP00000348751.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
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"cds_length": 1005,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3017,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000356386.6"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000396948.5",
"protein_id": "ENSP00000380152.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
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"cds_length": 1005,
"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000396948.5"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000527422.5",
"protein_id": "ENSP00000432138.1",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000527422.5"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
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"transcript": "ENST00000872161.1",
"protein_id": "ENSP00000542220.1",
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000872161.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872165.1",
"protein_id": "ENSP00000542224.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872165.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
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"transcript": "ENST00000872167.1",
"protein_id": "ENSP00000542226.1",
"transcript_support_level": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872167.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872168.1",
"protein_id": "ENSP00000542227.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"cdna_length": 3008,
"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000872168.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872169.1",
"protein_id": "ENSP00000542228.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000872169.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872171.1",
"protein_id": "ENSP00000542230.1",
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"biotype": "protein_coding",
"feature": "ENST00000872171.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872176.1",
"protein_id": "ENSP00000542235.1",
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"mane_select": null,
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"feature": "ENST00000872176.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872178.1",
"protein_id": "ENSP00000542237.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": 1613,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872178.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 11,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "BTN3A2",
"gene_hgnc_id": 1139,
"hgvs_c": "c.*7-96A>G",
"hgvs_p": null,
"transcript": "ENST00000872182.1",
"protein_id": "ENSP00000542241.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 334,
"cds_start": null,
"cds_end": null,
"cds_length": 1005,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1873,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000872182.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
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"splice_prediction_selected": "Benign",
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"phylop100way_prediction": "Benign",
"spliceai_max_score": 0,
"spliceai_max_prediction": "Benign",
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"acmg_classification": "Benign",
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"acmg_by_gene": [
{
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"criteria": [
"BP4_Strong",
"BA1"
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"verdict": "Benign",
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"inheritance_mode": "AR",
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{
"score": -12,
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"BA1"
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"verdict": "Benign",
"transcript": "ENST00000707189.1",
"gene_symbol": "ENSG00000291336",
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"effects": [
"intron_variant"
],
"inheritance_mode": "",
"hgvs_c": "n.1000-178512A>G",
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},
{
"score": -12,
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"criteria": [
"BP4_Strong",
"BA1"
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"verdict": "Benign",
"transcript": "ENST00000707191.1",
"gene_symbol": "ENSG00000291338",
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"effects": [
"intron_variant"
],
"inheritance_mode": "",
"hgvs_c": "n.1001-158030A>G",
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}
],
"clinvar_disease": "",
"clinvar_classification": "",
"clinvar_review_status": "",
"clinvar_submissions_summary": "",
"phenotype_combined": null,
"pathogenicity_classification_combined": null,
"custom_annotations": null
}
],
"message": null
}