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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 6-29660564-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=29660564&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "6",
"pos": 29660564,
"ref": "A",
"alt": "G",
"effect": "intron_variant",
"transcript": "ENST00000376917.8",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "NM_206809.4",
"protein_id": "NP_996532.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 247,
"cds_start": -4,
"cds_end": null,
"cds_length": 744,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2042,
"mane_select": "ENST00000376917.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000376917.8",
"protein_id": "ENSP00000366115.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 247,
"cds_start": -4,
"cds_end": null,
"cds_length": 744,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2042,
"mane_select": "NM_206809.4",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000376894.8",
"protein_id": "ENSP00000366091.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 295,
"cds_start": -4,
"cds_end": null,
"cds_length": 888,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2499,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000376898.7",
"protein_id": "ENSP00000366095.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 252,
"cds_start": -4,
"cds_end": null,
"cds_length": 759,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1027,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000494692.5",
"protein_id": "ENSP00000417405.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 229,
"cds_start": -4,
"cds_end": null,
"cds_length": 690,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 958,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000396701.6",
"protein_id": "ENSP00000379929.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 213,
"cds_start": -4,
"cds_end": null,
"cds_length": 642,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 910,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 2,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000376891.8",
"protein_id": "ENSP00000366088.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 206,
"cds_start": -4,
"cds_end": null,
"cds_length": 621,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 889,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.88+3267A>G",
"hgvs_p": null,
"transcript": "ENST00000376888.6",
"protein_id": "ENSP00000366085.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 131,
"cds_start": -4,
"cds_end": null,
"cds_length": 396,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1529,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.88+3267A>G",
"hgvs_p": null,
"transcript": "ENST00000490427.5",
"protein_id": "ENSP00000420350.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 108,
"cds_start": -4,
"cds_end": null,
"cds_length": 327,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 327,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 6,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.88+3267A>G",
"hgvs_p": null,
"transcript": "ENST00000483013.5",
"protein_id": "ENSP00000418090.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 92,
"cds_start": -4,
"cds_end": null,
"cds_length": 279,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 279,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "n.346+898A>G",
"hgvs_p": null,
"transcript": "ENST00000376889.3",
"protein_id": "ENSP00000366086.3",
"transcript_support_level": 1,
"aa_start": null,
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"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 3,
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"gene_symbol": "MOG",
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"hgvs_c": "n.430+898A>G",
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"transcript": "ENST00000469603.1",
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 3,
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"gene_symbol": "MOG",
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"hgvs_c": "n.430+898A>G",
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"transcript": "ENST00000476244.5",
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},
{
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"protein_coding": false,
"strand": true,
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],
"exon_rank": null,
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"gene_symbol": "MOG",
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"hgvs_c": "n.346+898A>G",
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"transcript": "ENST00000485211.5",
"protein_id": "ENSP00000418872.1",
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},
{
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],
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"gene_symbol": "MOG",
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"hgvs_c": "c.436+898A>G",
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"transcript": "NM_001363610.2",
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},
{
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],
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"exon_count": 8,
"intron_rank": 2,
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"gene_symbol": "MOG",
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"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "NM_002433.5",
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},
{
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],
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},
{
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],
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"gene_symbol": "MOG",
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"hgvs_c": "c.436+898A>G",
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"transcript": "NM_001008228.3",
"protein_id": "NP_001008229.1",
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"cds_start": -4,
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},
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"strand": true,
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],
"exon_rank": null,
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"exon_count": 8,
"intron_rank": 2,
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"gene_symbol": "MOG",
"gene_hgnc_id": 7197,
"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000396704.7",
"protein_id": "ENSP00000379932.3",
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],
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],
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},
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],
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"hgvs_c": "c.436+898A>G",
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"transcript": "NM_206812.4",
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},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"exon_count": 7,
"intron_rank": 2,
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"gene_symbol": "MOG",
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"hgvs_c": "c.436+898A>G",
"hgvs_p": null,
"transcript": "ENST00000431798.6",
"protein_id": "ENSP00000410866.2",
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},
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"consequences": [
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"splice_prediction_selected": "Benign",
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"phylop100way_prediction": "Benign",
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{
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"BS2"
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"verdict": "Benign",
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"inheritance_mode": "Unknown",
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],
"clinvar_disease": "",
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"clinvar_review_status": "",
"clinvar_submissions_summary": "",
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"custom_annotations": null
}
],
"message": null
}