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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 6-35278542-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=35278542&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "6",
"pos": 35278542,
"ref": "A",
"alt": "G",
"effect": "intron_variant",
"transcript": "NM_003427.5",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "NM_003427.5",
"protein_id": "NP_003418.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 570,
"cds_start": null,
"cds_end": null,
"cds_length": 1713,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000373953.8",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_003427.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000373953.8",
"protein_id": "ENSP00000363064.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 570,
"cds_start": null,
"cds_end": null,
"cds_length": 1713,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_003427.5",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000373953.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000339411.5",
"protein_id": "ENSP00000344097.5",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 515,
"cds_start": null,
"cds_end": null,
"cds_length": 1548,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000339411.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "n.201-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000484932.5",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000484932.5"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905457.1",
"protein_id": "ENSP00000575516.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 582,
"cds_start": null,
"cds_end": null,
"cds_length": 1749,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905457.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905439.1",
"protein_id": "ENSP00000575498.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 576,
"cds_start": null,
"cds_end": null,
"cds_length": 1731,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905439.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000944836.1",
"protein_id": "ENSP00000614895.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 573,
"cds_start": null,
"cds_end": null,
"cds_length": 1722,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000944836.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905449.1",
"protein_id": "ENSP00000575508.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 571,
"cds_start": null,
"cds_end": null,
"cds_length": 1716,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905449.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905434.1",
"protein_id": "ENSP00000575493.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 570,
"cds_start": null,
"cds_end": null,
"cds_length": 1713,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905434.1"
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-63-2547A>G",
"hgvs_p": null,
"transcript": "ENST00000905451.1",
"protein_id": "ENSP00000575510.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 570,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905451.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 14,
"intron_rank": 1,
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"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905436.1",
"protein_id": "ENSP00000575495.1",
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"cds_start": null,
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"cdna_start": null,
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"biotype": "protein_coding",
"feature": "ENST00000905436.1"
},
{
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"strand": true,
"consequences": [
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],
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"gene_symbol": "ZNF76",
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"hgvs_c": "c.-96-2514A>G",
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"transcript": "ENST00000905438.1",
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"feature": "ENST00000905438.1"
},
{
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"strand": true,
"consequences": [
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],
"exon_rank": null,
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"intron_rank": 1,
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"gene_symbol": "ZNF76",
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"biotype": "protein_coding",
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},
{
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],
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"gene_symbol": "ZNF76",
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"hgvs_c": "c.-96-2514A>G",
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},
{
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"strand": true,
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],
"exon_rank": null,
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"intron_rank": 1,
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"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905455.1",
"protein_id": "ENSP00000575514.1",
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},
{
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],
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"gene_symbol": "ZNF76",
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},
{
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],
"exon_rank": null,
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"gene_symbol": "ZNF76",
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"hgvs_c": "c.-96-2514A>G",
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"transcript": "ENST00000905442.1",
"protein_id": "ENSP00000575501.1",
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"biotype": "protein_coding",
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},
{
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],
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"exon_count": 13,
"intron_rank": 1,
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"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905453.1",
"protein_id": "ENSP00000575512.1",
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},
{
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],
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},
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],
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"gene_symbol": "ZNF76",
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"hgvs_c": "c.-96-2514A>G",
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},
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],
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"biotype": "protein_coding",
"feature": "ENST00000905441.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 13,
"intron_rank": 1,
"intron_rank_end": null,
"gene_symbol": "ZNF76",
"gene_hgnc_id": 13149,
"hgvs_c": "c.-96-2514A>G",
"hgvs_p": null,
"transcript": "ENST00000905458.1",
"protein_id": "ENSP00000575517.1",
"transcript_support_level": null,
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"aa_end": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905458.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
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],
"exon_rank": null,
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