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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 6-44124392-T-G (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=44124392&ref=T&alt=G&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "6",
      "pos": 44124392,
      "ref": "T",
      "alt": "G",
      "effect": "intron_variant",
      "transcript": "NM_001318770.2",
      "consequences": [
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+2952A>C",
          "hgvs_p": null,
          "transcript": "NM_032111.4",
          "protein_id": "NP_115487.2",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 145,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 438,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000372014.5",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_032111.4"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+2952A>C",
          "hgvs_p": null,
          "transcript": "ENST00000372014.5",
          "protein_id": "ENSP00000361084.3",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 145,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 438,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_032111.4",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000372014.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.141+1561A>C",
          "hgvs_p": null,
          "transcript": "NM_001318770.2",
          "protein_id": "NP_001305699.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 198,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 597,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001318770.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.15+2241A>C",
          "hgvs_p": null,
          "transcript": "NM_001318769.2",
          "protein_id": "NP_001305698.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 156,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 471,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001318769.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+2991A>C",
          "hgvs_p": null,
          "transcript": "NM_001318767.2",
          "protein_id": "NP_001305696.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 145,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 438,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001318767.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+2863A>C",
          "hgvs_p": null,
          "transcript": "NM_001318768.2",
          "protein_id": "NP_001305697.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 145,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 438,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001318768.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+3594A>C",
          "hgvs_p": null,
          "transcript": "ENST00000872326.1",
          "protein_id": "ENSP00000542385.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 145,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 438,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000872326.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
          "intron_rank_end": null,
          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+2863A>C",
          "hgvs_p": null,
          "transcript": "ENST00000872327.1",
          "protein_id": "ENSP00000542386.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 145,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 438,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000872327.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
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          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+1561A>C",
          "hgvs_p": null,
          "transcript": "ENST00000872328.1",
          "protein_id": "ENSP00000542387.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": 145,
          "cds_start": null,
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          "cds_length": 438,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000872328.1"
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": 1,
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          "gene_symbol": "MRPL14",
          "gene_hgnc_id": 14279,
          "hgvs_c": "c.-19+2991A>C",
          "hgvs_p": null,
          "transcript": "ENST00000872329.1",
          "protein_id": "ENSP00000542388.1",
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          "cds_start": null,
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          "cdna_start": null,
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        {
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          "gene_symbol": "MRPL14",
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          "hgvs_c": "c.-19+324A>C",
          "hgvs_p": null,
          "transcript": "ENST00000872330.1",
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          "cds_start": null,
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          "cdna_start": null,
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        {
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          "gene_symbol": "MRPL14",
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        {
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          "gene_symbol": "MRPL14",
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        {
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        {
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          "gene_symbol": "MRPL14",
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          "hgvs_c": "c.-19+4273A>C",
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        {
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        {
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          "gene_symbol": "MRPL14",
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          "hgvs_c": "c.-19+1561A>C",
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          "transcript": "ENST00000930440.1",
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        {
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      "clinvar_disease": "",
      "clinvar_classification": "",
      "clinvar_review_status": "",
      "clinvar_submissions_summary": "",
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      "custom_annotations": null
    }
  ],
  "message": null
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.