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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 6-70528674-C-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=70528674&ref=C&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "6",
"pos": 70528674,
"ref": "C",
"alt": "T",
"effect": "intron_variant",
"transcript": "NM_001330996.3",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3775+222C>T",
"hgvs_p": null,
"transcript": "NM_001162529.3",
"protein_id": "NP_001156001.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1515,
"cds_start": null,
"cds_end": null,
"cds_length": 4548,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000418814.7",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001162529.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3775+222C>T",
"hgvs_p": null,
"transcript": "ENST00000418814.7",
"protein_id": "ENSP00000410768.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1515,
"cds_start": null,
"cds_end": null,
"cds_length": 4548,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001162529.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000418814.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": 14,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3775+222C>T",
"hgvs_p": null,
"transcript": "ENST00000370479.7",
"protein_id": "ENSP00000359510.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1515,
"cds_start": null,
"cds_end": null,
"cds_length": 4548,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000370479.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3187+222C>T",
"hgvs_p": null,
"transcript": "ENST00000361499.7",
"protein_id": "ENSP00000354913.3",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1319,
"cds_start": null,
"cds_end": null,
"cds_length": 3960,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000361499.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3136+222C>T",
"hgvs_p": null,
"transcript": "ENST00000457062.6",
"protein_id": "ENSP00000409201.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1302,
"cds_start": null,
"cds_end": null,
"cds_length": 3909,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000457062.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "NM_001330996.3",
"protein_id": "NP_001317925.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001330996.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "NM_001330999.3",
"protein_id": "NP_001317928.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001330999.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "NM_001351599.2",
"protein_id": "NP_001338528.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001351599.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "NM_001438501.1",
"protein_id": "NP_001425430.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001438501.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "NM_001438502.1",
"protein_id": "NP_001425431.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001438502.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "NM_001438503.1",
"protein_id": "NP_001425432.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001438503.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "ENST00000856122.1",
"protein_id": "ENSP00000526181.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000856122.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "ENST00000935394.1",
"protein_id": "ENSP00000605453.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935394.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "ENST00000935395.1",
"protein_id": "ENSP00000605454.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935395.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "ENST00000935396.1",
"protein_id": "ENSP00000605455.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
"cds_end": null,
"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935396.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "ENST00000935401.1",
"protein_id": "ENSP00000605460.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
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"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935401.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "ENST00000935404.1",
"protein_id": "ENSP00000605463.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
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"cds_length": 4626,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935404.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 18,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3853+222C>T",
"hgvs_p": null,
"transcript": "ENST00000935407.1",
"protein_id": "ENSP00000605466.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1541,
"cds_start": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000935407.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": 15,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3775+222C>T",
"hgvs_p": null,
"transcript": "NM_001351600.2",
"protein_id": "NP_001338529.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1515,
"cds_start": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001351600.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3775+222C>T",
"hgvs_p": null,
"transcript": "NM_001351602.2",
"protein_id": "NP_001338531.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1515,
"cds_start": null,
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"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001351602.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 23,
"intron_rank": 17,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3775+222C>T",
"hgvs_p": null,
"transcript": "NM_001351607.2",
"protein_id": "NP_001338536.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1515,
"cds_start": null,
"cds_end": null,
"cds_length": 4548,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001351607.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": 16,
"intron_rank_end": null,
"gene_symbol": "FAM135A",
"gene_hgnc_id": 21084,
"hgvs_c": "c.3775+222C>T",
"hgvs_p": null,
"transcript": "NM_001438504.1",
"protein_id": "NP_001425433.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1515,
"cds_start": null,
"cds_end": null,
"cds_length": 4548,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001438504.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
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