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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 6-73519341-G-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=73519341&ref=G&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "6",
"pos": 73519341,
"ref": "G",
"alt": "A",
"effect": "missense_variant",
"transcript": "NM_001402.6",
"consequences": [
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "NM_001402.6",
"protein_id": "NP_001393.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000309268.11",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001402.6"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000309268.11",
"protein_id": "ENSP00000339053.4",
"transcript_support_level": 1,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001402.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000309268.11"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000316292.13",
"protein_id": "ENSP00000339063.7",
"transcript_support_level": 1,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000316292.13"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000850909.1",
"protein_id": "ENSP00000520989.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 470,
"cds_start": 320,
"cds_end": null,
"cds_length": 1413,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000850909.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000331523.7",
"protein_id": "ENSP00000330054.2",
"transcript_support_level": 5,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000331523.7"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000356303.7",
"protein_id": "ENSP00000348651.3",
"transcript_support_level": 2,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000356303.7"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000455918.2",
"protein_id": "ENSP00000392366.2",
"transcript_support_level": 2,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000455918.2"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000615060.5",
"protein_id": "ENSP00000479055.2",
"transcript_support_level": 5,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000615060.5"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000676710.1",
"protein_id": "ENSP00000504335.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000676710.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000677236.1",
"protein_id": "ENSP00000503192.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000677236.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000678508.1",
"protein_id": "ENSP00000503249.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000678508.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000678702.1",
"protein_id": "ENSP00000503823.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000678702.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000875814.1",
"protein_id": "ENSP00000545873.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000875814.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000875816.1",
"protein_id": "ENSP00000545875.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000875816.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000875817.1",
"protein_id": "ENSP00000545876.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000875817.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000933277.1",
"protein_id": "ENSP00000603336.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000933277.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 4,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000967436.1",
"protein_id": "ENSP00000637495.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 462,
"cds_start": 320,
"cds_end": null,
"cds_length": 1389,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000967436.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.311C>T",
"hgvs_p": "p.Ser104Phe",
"transcript": "ENST00000610520.5",
"protein_id": "ENSP00000479609.2",
"transcript_support_level": 5,
"aa_start": 104,
"aa_end": null,
"aa_length": 459,
"cds_start": 311,
"cds_end": null,
"cds_length": 1380,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000610520.5"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.311C>T",
"hgvs_p": "p.Ser104Phe",
"transcript": "ENST00000678703.1",
"protein_id": "ENSP00000504801.1",
"transcript_support_level": null,
"aa_start": 104,
"aa_end": null,
"aa_length": 459,
"cds_start": 311,
"cds_end": null,
"cds_length": 1380,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000678703.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000850907.1",
"protein_id": "ENSP00000520987.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 451,
"cds_start": 320,
"cds_end": null,
"cds_length": 1356,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000850907.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000850908.1",
"protein_id": "ENSP00000520988.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 446,
"cds_start": 320,
"cds_end": null,
"cds_length": 1341,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000850908.1"
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "EEF1A1",
"gene_hgnc_id": 3189,
"hgvs_c": "c.320C>T",
"hgvs_p": "p.Ser107Phe",
"transcript": "ENST00000967435.1",
"protein_id": "ENSP00000637494.1",
"transcript_support_level": null,
"aa_start": 107,
"aa_end": null,
"aa_length": 437,
"cds_start": 320,
"cds_end": null,
"cds_length": 1314,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
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}