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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 6-89630727-C-T (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=6&pos=89630727&ref=C&alt=T&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "6",
      "pos": 89630727,
      "ref": "C",
      "alt": "T",
      "effect": "missense_variant",
      "transcript": "NM_001242809.2",
      "consequences": [
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1907C>T",
          "hgvs_p": "p.Pro636Leu",
          "transcript": "NM_001242809.2",
          "protein_id": "NP_001229738.1",
          "transcript_support_level": null,
          "aa_start": 636,
          "aa_end": null,
          "aa_length": 727,
          "cds_start": 1907,
          "cds_end": null,
          "cds_length": 2184,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000339746.9",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001242809.2"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": true,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1907C>T",
          "hgvs_p": "p.Pro636Leu",
          "transcript": "ENST00000339746.9",
          "protein_id": "ENSP00000345767.4",
          "transcript_support_level": 1,
          "aa_start": 636,
          "aa_end": null,
          "aa_length": 727,
          "cds_start": 1907,
          "cds_end": null,
          "cds_length": 2184,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_001242809.2",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000339746.9"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1892C>T",
          "hgvs_p": "p.Pro631Leu",
          "transcript": "ENST00000447838.6",
          "protein_id": "ENSP00000396771.2",
          "transcript_support_level": 1,
          "aa_start": 631,
          "aa_end": null,
          "aa_length": 722,
          "cds_start": 1892,
          "cds_end": null,
          "cds_length": 2169,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000447838.6"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1802C>T",
          "hgvs_p": "p.Pro601Leu",
          "transcript": "ENST00000369408.9",
          "protein_id": "ENSP00000358416.5",
          "transcript_support_level": 1,
          "aa_start": 601,
          "aa_end": null,
          "aa_length": 692,
          "cds_start": 1802,
          "cds_end": null,
          "cds_length": 2079,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000369408.9"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": true,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 13,
          "exon_rank_end": null,
          "exon_count": 13,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "n.1724C>T",
          "hgvs_p": null,
          "transcript": "ENST00000518253.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "retained_intron",
          "feature": "ENST00000518253.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "LYRM2",
          "gene_hgnc_id": 25229,
          "hgvs_c": "n.186+7015G>A",
          "hgvs_p": null,
          "transcript": "ENST00000412237.6",
          "protein_id": "ENSP00000430316.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000412237.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "LYRM2",
          "gene_hgnc_id": 25229,
          "hgvs_c": "n.221-6125G>A",
          "hgvs_p": null,
          "transcript": "ENST00000520897.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000520897.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 5,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "LYRM2",
          "gene_hgnc_id": 25229,
          "hgvs_c": "n.368-6125G>A",
          "hgvs_p": null,
          "transcript": "ENST00000523793.5",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000523793.5"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.2024C>T",
          "hgvs_p": "p.Pro675Leu",
          "transcript": "ENST00000960502.1",
          "protein_id": "ENSP00000630561.1",
          "transcript_support_level": null,
          "aa_start": 675,
          "aa_end": null,
          "aa_length": 766,
          "cds_start": 2024,
          "cds_end": null,
          "cds_length": 2301,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000960502.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1985C>T",
          "hgvs_p": "p.Pro662Leu",
          "transcript": "ENST00000960500.1",
          "protein_id": "ENSP00000630559.1",
          "transcript_support_level": null,
          "aa_start": 662,
          "aa_end": null,
          "aa_length": 753,
          "cds_start": 1985,
          "cds_end": null,
          "cds_length": 2262,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000960500.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 17,
          "exon_rank_end": null,
          "exon_count": 17,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1982C>T",
          "hgvs_p": "p.Pro661Leu",
          "transcript": "ENST00000710308.1",
          "protein_id": "ENSP00000518190.1",
          "transcript_support_level": null,
          "aa_start": 661,
          "aa_end": null,
          "aa_length": 752,
          "cds_start": 1982,
          "cds_end": null,
          "cds_length": 2259,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000710308.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1907C>T",
          "hgvs_p": "p.Pro636Leu",
          "transcript": "NM_001242811.1",
          "protein_id": "NP_001229740.1",
          "transcript_support_level": null,
          "aa_start": 636,
          "aa_end": null,
          "aa_length": 727,
          "cds_start": 1907,
          "cds_end": null,
          "cds_length": 2184,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001242811.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1907C>T",
          "hgvs_p": "p.Pro636Leu",
          "transcript": "ENST00000522441.5",
          "protein_id": "ENSP00000430985.1",
          "transcript_support_level": 2,
          "aa_start": 636,
          "aa_end": null,
          "aa_length": 727,
          "cds_start": 1907,
          "cds_end": null,
          "cds_length": 2184,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000522441.5"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 17,
          "exon_rank_end": null,
          "exon_count": 17,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1907C>T",
          "hgvs_p": "p.Pro636Leu",
          "transcript": "ENST00000862698.1",
          "protein_id": "ENSP00000532757.1",
          "transcript_support_level": null,
          "aa_start": 636,
          "aa_end": null,
          "aa_length": 727,
          "cds_start": 1907,
          "cds_end": null,
          "cds_length": 2184,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000862698.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1907C>T",
          "hgvs_p": "p.Pro636Leu",
          "transcript": "ENST00000960510.1",
          "protein_id": "ENSP00000630569.1",
          "transcript_support_level": null,
          "aa_start": 636,
          "aa_end": null,
          "aa_length": 727,
          "cds_start": 1907,
          "cds_end": null,
          "cds_length": 2184,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000960510.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 16,
          "exon_rank_end": null,
          "exon_count": 16,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1892C>T",
          "hgvs_p": "p.Pro631Leu",
          "transcript": "NM_014942.4",
          "protein_id": "NP_055757.3",
          "transcript_support_level": null,
          "aa_start": 631,
          "aa_end": null,
          "aa_length": 722,
          "cds_start": 1892,
          "cds_end": null,
          "cds_length": 2169,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_014942.4"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1829C>T",
          "hgvs_p": "p.Pro610Leu",
          "transcript": "ENST00000862695.1",
          "protein_id": "ENSP00000532754.1",
          "transcript_support_level": null,
          "aa_start": 610,
          "aa_end": null,
          "aa_length": 701,
          "cds_start": 1829,
          "cds_end": null,
          "cds_length": 2106,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000862695.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1814C>T",
          "hgvs_p": "p.Pro605Leu",
          "transcript": "ENST00000913471.1",
          "protein_id": "ENSP00000583530.1",
          "transcript_support_level": null,
          "aa_start": 605,
          "aa_end": null,
          "aa_length": 696,
          "cds_start": 1814,
          "cds_end": null,
          "cds_length": 2091,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913471.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1808C>T",
          "hgvs_p": "p.Pro603Leu",
          "transcript": "ENST00000862689.1",
          "protein_id": "ENSP00000532748.1",
          "transcript_support_level": null,
          "aa_start": 603,
          "aa_end": null,
          "aa_length": 694,
          "cds_start": 1808,
          "cds_end": null,
          "cds_length": 2085,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000862689.1"
        },
        {
          "aa_ref": "P",
          "aa_alt": "L",
          "canonical": false,
          "protein_coding": true,
          "strand": true,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 15,
          "exon_rank_end": null,
          "exon_count": 15,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ANKRD6",
          "gene_hgnc_id": 17280,
          "hgvs_c": "c.1808C>T",
          "hgvs_p": "p.Pro603Leu",
          "transcript": "ENST00000862690.1",
          "protein_id": "ENSP00000532749.1",
          "transcript_support_level": null,
          "aa_start": 603,
          "aa_end": null,
          "aa_length": 694,
          "cds_start": 1808,
          "cds_end": null,
          "cds_length": 2085,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000862690.1"
        },
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      "clinvar_classification": "Benign",
      "clinvar_review_status": "no assertion criteria provided",
      "clinvar_submissions_summary": "null",
      "phenotype_combined": "ANKRD6-related disorder",
      "pathogenicity_classification_combined": "Benign",
      "custom_annotations": null
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  "message": null
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.