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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 7-108159534-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=7&pos=108159534&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "7",
"pos": 108159534,
"ref": "T",
"alt": "C",
"effect": "synonymous_variant",
"transcript": "ENST00000379028.8",
"consequences": [
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 32,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3606A>G",
"hgvs_p": "p.Glu1202Glu",
"transcript": "NM_001037132.4",
"protein_id": "NP_001032209.1",
"transcript_support_level": null,
"aa_start": 1202,
"aa_end": null,
"aa_length": 1304,
"cds_start": 3606,
"cds_end": null,
"cds_length": 3915,
"cdna_start": 4131,
"cdna_end": null,
"cdna_length": 6701,
"mane_select": "ENST00000379028.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 32,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3606A>G",
"hgvs_p": "p.Glu1202Glu",
"transcript": "ENST00000379028.8",
"protein_id": "ENSP00000368314.3",
"transcript_support_level": 5,
"aa_start": 1202,
"aa_end": null,
"aa_length": 1304,
"cds_start": 3606,
"cds_end": null,
"cds_length": 3915,
"cdna_start": 4131,
"cdna_end": null,
"cdna_length": 6701,
"mane_select": "NM_001037132.4",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3270A>G",
"hgvs_p": "p.Glu1090Glu",
"transcript": "ENST00000379024.8",
"protein_id": "ENSP00000368310.4",
"transcript_support_level": 1,
"aa_start": 1090,
"aa_end": null,
"aa_length": 1192,
"cds_start": 3270,
"cds_end": null,
"cds_length": 3579,
"cdna_start": 3680,
"cdna_end": null,
"cdna_length": 5782,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3243A>G",
"hgvs_p": "p.Glu1081Glu",
"transcript": "ENST00000351718.8",
"protein_id": "ENSP00000325269.6",
"transcript_support_level": 1,
"aa_start": 1081,
"aa_end": null,
"aa_length": 1183,
"cds_start": 3243,
"cds_end": null,
"cds_length": 3552,
"cdna_start": 3671,
"cdna_end": null,
"cdna_length": 6228,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 32,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3615A>G",
"hgvs_p": "p.Glu1205Glu",
"transcript": "NM_001371156.1",
"protein_id": "NP_001358085.1",
"transcript_support_level": null,
"aa_start": 1205,
"aa_end": null,
"aa_length": 1307,
"cds_start": 3615,
"cds_end": null,
"cds_length": 3924,
"cdna_start": 4140,
"cdna_end": null,
"cdna_length": 6710,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 33,
"exon_rank_end": null,
"exon_count": 34,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3606A>G",
"hgvs_p": "p.Glu1202Glu",
"transcript": "NM_001371131.1",
"protein_id": "NP_001358060.1",
"transcript_support_level": null,
"aa_start": 1202,
"aa_end": null,
"aa_length": 1304,
"cds_start": 3606,
"cds_end": null,
"cds_length": 3915,
"cdna_start": 4212,
"cdna_end": null,
"cdna_length": 6782,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3570A>G",
"hgvs_p": "p.Glu1190Glu",
"transcript": "NM_001371169.1",
"protein_id": "NP_001358098.1",
"transcript_support_level": null,
"aa_start": 1190,
"aa_end": null,
"aa_length": 1292,
"cds_start": 3570,
"cds_end": null,
"cds_length": 3879,
"cdna_start": 4095,
"cdna_end": null,
"cdna_length": 6665,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3558A>G",
"hgvs_p": "p.Glu1186Glu",
"transcript": "NM_001371119.1",
"protein_id": "NP_001358048.1",
"transcript_support_level": null,
"aa_start": 1186,
"aa_end": null,
"aa_length": 1288,
"cds_start": 3558,
"cds_end": null,
"cds_length": 3867,
"cdna_start": 3940,
"cdna_end": null,
"cdna_length": 6510,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3549A>G",
"hgvs_p": "p.Glu1183Glu",
"transcript": "NM_001371124.1",
"protein_id": "NP_001358053.1",
"transcript_support_level": null,
"aa_start": 1183,
"aa_end": null,
"aa_length": 1285,
"cds_start": 3549,
"cds_end": null,
"cds_length": 3858,
"cdna_start": 3931,
"cdna_end": null,
"cdna_length": 6501,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 32,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3549A>G",
"hgvs_p": "p.Glu1183Glu",
"transcript": "NM_001371126.1",
"protein_id": "NP_001358055.1",
"transcript_support_level": null,
"aa_start": 1183,
"aa_end": null,
"aa_length": 1285,
"cds_start": 3549,
"cds_end": null,
"cds_length": 3858,
"cdna_start": 4228,
"cdna_end": null,
"cdna_length": 6798,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3549A>G",
"hgvs_p": "p.Glu1183Glu",
"transcript": "NM_001371172.1",
"protein_id": "NP_001358101.1",
"transcript_support_level": null,
"aa_start": 1183,
"aa_end": null,
"aa_length": 1285,
"cds_start": 3549,
"cds_end": null,
"cds_length": 3858,
"cdna_start": 4074,
"cdna_end": null,
"cdna_length": 6644,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3513A>G",
"hgvs_p": "p.Glu1171Glu",
"transcript": "NM_001371146.1",
"protein_id": "NP_001358075.1",
"transcript_support_level": null,
"aa_start": 1171,
"aa_end": null,
"aa_length": 1273,
"cds_start": 3513,
"cds_end": null,
"cds_length": 3822,
"cdna_start": 4038,
"cdna_end": null,
"cdna_length": 6608,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3444A>G",
"hgvs_p": "p.Glu1148Glu",
"transcript": "NM_001371138.1",
"protein_id": "NP_001358067.1",
"transcript_support_level": null,
"aa_start": 1148,
"aa_end": null,
"aa_length": 1250,
"cds_start": 3444,
"cds_end": null,
"cds_length": 3753,
"cdna_start": 3969,
"cdna_end": null,
"cdna_length": 6539,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3423A>G",
"hgvs_p": "p.Glu1141Glu",
"transcript": "NM_001371158.1",
"protein_id": "NP_001358087.1",
"transcript_support_level": null,
"aa_start": 1141,
"aa_end": null,
"aa_length": 1243,
"cds_start": 3423,
"cds_end": null,
"cds_length": 3732,
"cdna_start": 3948,
"cdna_end": null,
"cdna_length": 6518,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3396A>G",
"hgvs_p": "p.Glu1132Glu",
"transcript": "NM_001371145.1",
"protein_id": "NP_001358074.1",
"transcript_support_level": null,
"aa_start": 1132,
"aa_end": null,
"aa_length": 1234,
"cds_start": 3396,
"cds_end": null,
"cds_length": 3705,
"cdna_start": 3921,
"cdna_end": null,
"cdna_length": 6491,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3369A>G",
"hgvs_p": "p.Glu1123Glu",
"transcript": "NM_001371136.1",
"protein_id": "NP_001358065.1",
"transcript_support_level": null,
"aa_start": 1123,
"aa_end": null,
"aa_length": 1225,
"cds_start": 3369,
"cds_end": null,
"cds_length": 3678,
"cdna_start": 3894,
"cdna_end": null,
"cdna_length": 6464,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3360A>G",
"hgvs_p": "p.Glu1120Glu",
"transcript": "NM_001371140.1",
"protein_id": "NP_001358069.1",
"transcript_support_level": null,
"aa_start": 1120,
"aa_end": null,
"aa_length": 1222,
"cds_start": 3360,
"cds_end": null,
"cds_length": 3669,
"cdna_start": 3885,
"cdna_end": null,
"cdna_length": 6455,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3336A>G",
"hgvs_p": "p.Glu1112Glu",
"transcript": "NM_001371123.1",
"protein_id": "NP_001358052.1",
"transcript_support_level": null,
"aa_start": 1112,
"aa_end": null,
"aa_length": 1214,
"cds_start": 3336,
"cds_end": null,
"cds_length": 3645,
"cdna_start": 3718,
"cdna_end": null,
"cdna_length": 6288,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3336A>G",
"hgvs_p": "p.Glu1112Glu",
"transcript": "NM_001371149.1",
"protein_id": "NP_001358078.1",
"transcript_support_level": null,
"aa_start": 1112,
"aa_end": null,
"aa_length": 1214,
"cds_start": 3336,
"cds_end": null,
"cds_length": 3645,
"cdna_start": 3861,
"cdna_end": null,
"cdna_length": 6431,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3327A>G",
"hgvs_p": "p.Glu1109Glu",
"transcript": "NM_001193582.2",
"protein_id": "NP_001180511.1",
"transcript_support_level": null,
"aa_start": 1109,
"aa_end": null,
"aa_length": 1211,
"cds_start": 3327,
"cds_end": null,
"cds_length": 3636,
"cdna_start": 3852,
"cdna_end": null,
"cdna_length": 6422,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3327A>G",
"hgvs_p": "p.Glu1109Glu",
"transcript": "NM_001371128.1",
"protein_id": "NP_001358057.1",
"transcript_support_level": null,
"aa_start": 1109,
"aa_end": null,
"aa_length": 1211,
"cds_start": 3327,
"cds_end": null,
"cds_length": 3636,
"cdna_start": 3970,
"cdna_end": null,
"cdna_length": 6540,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3327A>G",
"hgvs_p": "p.Glu1109Glu",
"transcript": "NM_001371144.1",
"protein_id": "NP_001358073.1",
"transcript_support_level": null,
"aa_start": 1109,
"aa_end": null,
"aa_length": 1211,
"cds_start": 3327,
"cds_end": null,
"cds_length": 3636,
"cdna_start": 4116,
"cdna_end": null,
"cdna_length": 6686,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "E",
"aa_alt": "E",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
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}
],
"message": null
}