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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 7-108167037-G-A (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=7&pos=108167037&ref=G&alt=A&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "7",
"pos": 108167037,
"ref": "G",
"alt": "A",
"effect": "missense_variant",
"transcript": "NM_001037132.4",
"consequences": [
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3350C>T",
"hgvs_p": "p.Ser1117Phe",
"transcript": "NM_001037132.4",
"protein_id": "NP_001032209.1",
"transcript_support_level": null,
"aa_start": 1117,
"aa_end": null,
"aa_length": 1304,
"cds_start": 3350,
"cds_end": null,
"cds_length": 3915,
"cdna_start": 3875,
"cdna_end": null,
"cdna_length": 6701,
"mane_select": "ENST00000379028.8",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3350C>T",
"hgvs_p": "p.Ser1117Phe",
"transcript": "ENST00000379028.8",
"protein_id": "ENSP00000368314.3",
"transcript_support_level": 5,
"aa_start": 1117,
"aa_end": null,
"aa_length": 1304,
"cds_start": 3350,
"cds_end": null,
"cds_length": 3915,
"cdna_start": 3875,
"cdna_end": null,
"cdna_length": 6701,
"mane_select": "NM_001037132.4",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": 27,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3131-6545C>T",
"hgvs_p": null,
"transcript": "ENST00000379024.8",
"protein_id": "ENSP00000368310.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1192,
"cds_start": -4,
"cds_end": null,
"cds_length": 3579,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5782,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 25,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3104-6545C>T",
"hgvs_p": null,
"transcript": "ENST00000351718.8",
"protein_id": "ENSP00000325269.6",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1183,
"cds_start": -4,
"cds_end": null,
"cds_length": 3552,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6228,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3359C>T",
"hgvs_p": "p.Ser1120Phe",
"transcript": "NM_001371156.1",
"protein_id": "NP_001358085.1",
"transcript_support_level": null,
"aa_start": 1120,
"aa_end": null,
"aa_length": 1307,
"cds_start": 3359,
"cds_end": null,
"cds_length": 3924,
"cdna_start": 3884,
"cdna_end": null,
"cdna_length": 6710,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 31,
"exon_rank_end": null,
"exon_count": 34,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3350C>T",
"hgvs_p": "p.Ser1117Phe",
"transcript": "NM_001371131.1",
"protein_id": "NP_001358060.1",
"transcript_support_level": null,
"aa_start": 1117,
"aa_end": null,
"aa_length": 1304,
"cds_start": 3350,
"cds_end": null,
"cds_length": 3915,
"cdna_start": 3956,
"cdna_end": null,
"cdna_length": 6782,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3314C>T",
"hgvs_p": "p.Ser1105Phe",
"transcript": "NM_001371169.1",
"protein_id": "NP_001358098.1",
"transcript_support_level": null,
"aa_start": 1105,
"aa_end": null,
"aa_length": 1292,
"cds_start": 3314,
"cds_end": null,
"cds_length": 3879,
"cdna_start": 3839,
"cdna_end": null,
"cdna_length": 6665,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3302C>T",
"hgvs_p": "p.Ser1101Phe",
"transcript": "NM_001371119.1",
"protein_id": "NP_001358048.1",
"transcript_support_level": null,
"aa_start": 1101,
"aa_end": null,
"aa_length": 1288,
"cds_start": 3302,
"cds_end": null,
"cds_length": 3867,
"cdna_start": 3684,
"cdna_end": null,
"cdna_length": 6510,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3293C>T",
"hgvs_p": "p.Ser1098Phe",
"transcript": "NM_001371124.1",
"protein_id": "NP_001358053.1",
"transcript_support_level": null,
"aa_start": 1098,
"aa_end": null,
"aa_length": 1285,
"cds_start": 3293,
"cds_end": null,
"cds_length": 3858,
"cdna_start": 3675,
"cdna_end": null,
"cdna_length": 6501,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3293C>T",
"hgvs_p": "p.Ser1098Phe",
"transcript": "NM_001371126.1",
"protein_id": "NP_001358055.1",
"transcript_support_level": null,
"aa_start": 1098,
"aa_end": null,
"aa_length": 1285,
"cds_start": 3293,
"cds_end": null,
"cds_length": 3858,
"cdna_start": 3972,
"cdna_end": null,
"cdna_length": 6798,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3293C>T",
"hgvs_p": "p.Ser1098Phe",
"transcript": "NM_001371172.1",
"protein_id": "NP_001358101.1",
"transcript_support_level": null,
"aa_start": 1098,
"aa_end": null,
"aa_length": 1285,
"cds_start": 3293,
"cds_end": null,
"cds_length": 3858,
"cdna_start": 3818,
"cdna_end": null,
"cdna_length": 6644,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3257C>T",
"hgvs_p": "p.Ser1086Phe",
"transcript": "NM_001371146.1",
"protein_id": "NP_001358075.1",
"transcript_support_level": null,
"aa_start": 1086,
"aa_end": null,
"aa_length": 1273,
"cds_start": 3257,
"cds_end": null,
"cds_length": 3822,
"cdna_start": 3782,
"cdna_end": null,
"cdna_length": 6608,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3188C>T",
"hgvs_p": "p.Ser1063Phe",
"transcript": "NM_001371138.1",
"protein_id": "NP_001358067.1",
"transcript_support_level": null,
"aa_start": 1063,
"aa_end": null,
"aa_length": 1250,
"cds_start": 3188,
"cds_end": null,
"cds_length": 3753,
"cdna_start": 3713,
"cdna_end": null,
"cdna_length": 6539,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3167C>T",
"hgvs_p": "p.Ser1056Phe",
"transcript": "NM_001371158.1",
"protein_id": "NP_001358087.1",
"transcript_support_level": null,
"aa_start": 1056,
"aa_end": null,
"aa_length": 1243,
"cds_start": 3167,
"cds_end": null,
"cds_length": 3732,
"cdna_start": 3692,
"cdna_end": null,
"cdna_length": 6518,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 31,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3005C>T",
"hgvs_p": "p.Ser1002Phe",
"transcript": "NM_001371143.1",
"protein_id": "NP_001358072.1",
"transcript_support_level": null,
"aa_start": 1002,
"aa_end": null,
"aa_length": 1189,
"cds_start": 3005,
"cds_end": null,
"cds_length": 3570,
"cdna_start": 3606,
"cdna_end": null,
"cdna_length": 6432,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 27,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3005C>T",
"hgvs_p": "p.Ser1002Phe",
"transcript": "NM_001371164.1",
"protein_id": "NP_001358093.1",
"transcript_support_level": null,
"aa_start": 1002,
"aa_end": null,
"aa_length": 1189,
"cds_start": 3005,
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"cds_length": 3570,
"cdna_start": 3588,
"cdna_end": null,
"cdna_length": 6414,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 34,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3359C>T",
"hgvs_p": "p.Ser1120Phe",
"transcript": "XM_011516253.3",
"protein_id": "XP_011514555.1",
"transcript_support_level": null,
"aa_start": 1120,
"aa_end": null,
"aa_length": 1311,
"cds_start": 3359,
"cds_end": null,
"cds_length": 3936,
"cdna_start": 3884,
"cdna_end": null,
"cdna_length": 6722,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3359C>T",
"hgvs_p": "p.Ser1120Phe",
"transcript": "XM_011516255.2",
"protein_id": "XP_011514557.1",
"transcript_support_level": null,
"aa_start": 1120,
"aa_end": null,
"aa_length": 1311,
"cds_start": 3359,
"cds_end": null,
"cds_length": 3936,
"cdna_start": 3638,
"cdna_end": null,
"cdna_length": 6476,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 30,
"exon_rank_end": null,
"exon_count": 34,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3350C>T",
"hgvs_p": "p.Ser1117Phe",
"transcript": "XM_006716003.3",
"protein_id": "XP_006716066.1",
"transcript_support_level": null,
"aa_start": 1117,
"aa_end": null,
"aa_length": 1308,
"cds_start": 3350,
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"cdna_start": 3875,
"cdna_end": null,
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"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3341C>T",
"hgvs_p": "p.Ser1114Phe",
"transcript": "XM_011516257.3",
"protein_id": "XP_011514559.1",
"transcript_support_level": null,
"aa_start": 1114,
"aa_end": null,
"aa_length": 1305,
"cds_start": 3341,
"cds_end": null,
"cds_length": 3918,
"cdna_start": 3866,
"cdna_end": null,
"cdna_length": 6704,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 28,
"exon_rank_end": null,
"exon_count": 32,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3341C>T",
"hgvs_p": "p.Ser1114Phe",
"transcript": "XM_011516258.2",
"protein_id": "XP_011514560.1",
"transcript_support_level": null,
"aa_start": 1114,
"aa_end": null,
"aa_length": 1305,
"cds_start": 3341,
"cds_end": null,
"cds_length": 3918,
"cdna_start": 3620,
"cdna_end": null,
"cdna_length": 6458,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "NRCAM",
"gene_hgnc_id": 7994,
"hgvs_c": "c.3329C>T",
"hgvs_p": "p.Ser1110Phe",
"transcript": "XM_011516259.3",
"protein_id": "XP_011514561.1",
"transcript_support_level": null,
"aa_start": 1110,
"aa_end": null,
"aa_length": 1301,
"cds_start": 3329,
"cds_end": null,
"cds_length": 3906,
"cdna_start": 3854,
"cdna_end": null,
"cdna_length": 6692,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "F",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 29,
"exon_rank_end": null,
"exon_count": 33,
"intron_rank": null,
"intron_rank_end": null,
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