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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 7-13919781-G-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=7&pos=13919781&ref=G&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "7",
"pos": 13919781,
"ref": "G",
"alt": "T",
"effect": "intron_variant",
"transcript": "ENST00000430479.6",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.803-8474C>A",
"hgvs_p": null,
"transcript": "NM_004956.5",
"protein_id": "NP_004947.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 477,
"cds_start": -4,
"cds_end": null,
"cds_length": 1434,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6459,
"mane_select": "ENST00000430479.6",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.803-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000430479.6",
"protein_id": "ENSP00000405327.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 477,
"cds_start": -4,
"cds_end": null,
"cds_length": 1434,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6459,
"mane_select": "NM_004956.5",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.845-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000405358.8",
"protein_id": "ENSP00000384085.4",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 491,
"cds_start": -4,
"cds_end": null,
"cds_length": 1476,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4181,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.803-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000405218.6",
"protein_id": "ENSP00000385551.2",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 477,
"cds_start": -4,
"cds_end": null,
"cds_length": 1434,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3391,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.749-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000403685.5",
"protein_id": "ENSP00000385686.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 459,
"cds_start": -4,
"cds_end": null,
"cds_length": 1380,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1603,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.803-10081C>A",
"hgvs_p": null,
"transcript": "ENST00000405192.6",
"protein_id": "ENSP00000385381.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 454,
"cds_start": -4,
"cds_end": null,
"cds_length": 1365,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4402,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.683-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000403527.6",
"protein_id": "ENSP00000384138.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 437,
"cds_start": -4,
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"cdna_start": null,
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"cdna_length": 6187,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 4,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "c.629-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000438956.6",
"protein_id": "ENSP00000393078.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 419,
"cds_start": -4,
"cds_end": null,
"cds_length": 1260,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 3253,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "n.803-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000443137.5",
"protein_id": "ENSP00000413836.1",
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2050,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 5,
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"gene_symbol": "ETV1",
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"hgvs_c": "n.757-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000472931.6",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
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"aa_length": null,
"cds_start": -4,
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"feature": null
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 6,
"intron_rank": 5,
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"gene_symbol": "ETV1",
"gene_hgnc_id": 3490,
"hgvs_c": "n.788-8474C>A",
"hgvs_p": null,
"transcript": "ENST00000476720.6",
"protein_id": null,
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},
{
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"protein_coding": true,
"strand": false,
"consequences": [
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],
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"hgvs_c": "c.803-8474C>A",
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"transcript": "NM_001370555.1",
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},
{
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"strand": false,
"consequences": [
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],
"exon_rank": null,
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"gene_symbol": "ETV1",
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"transcript": "NM_001370556.1",
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},
{
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],
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"gene_symbol": "ETV1",
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"hgvs_c": "c.749-8474C>A",
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},
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],
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},
{
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],
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"gene_symbol": "ETV1",
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},
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},
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],
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"gene_symbol": "ETV1",
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"hgvs_c": "c.683-8474C>A",
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"transcript": "NM_001163150.2",
"protein_id": "NP_001156622.1",
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],
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"gene_symbol": "ETV1",
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},
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],
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},
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],
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"gene_symbol": "ETV1",
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},
{
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"strand": false,
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],
"exon_rank": null,
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"intron_rank": 7,
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"gene_symbol": "ETV1",
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"hgvs_c": "c.845-8474C>A",
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},
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}